Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 107 2e-18
seq1059 93.3 4e-14
>seq1257
Length=777
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || | ||| | || ||| ||||| | ||| ||||||||||||||| || || ||
Sbjct 566 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 507
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || | |||| || |||||||| ||||| || |||| | ||||| || | ||
Sbjct 506 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 447
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||| | ||| |||| | | |||| | | | || ||| || || ||
Sbjct 446 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 388
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| ||||| |||||||| |||| ||||| ||||||||||||||
Sbjct 387 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 340
>seq1059
Length=424
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| ||||| ||| ||| |||||||||||||| || || || || | ||||
Sbjct 227 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 286
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| || ||||| ||||| || |||| | ||||| || | |||| | ||||||| |
Sbjct 287 TCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 345
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | |||| | | | |||||| || || ||||| | ||||| ||
Sbjct 346 TTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 405
Query 41830 TTTACCCGTCAGCGTCTT 41847
||||| ||||| |||||
Sbjct 406 CTTACCTGTCAGTGTCTT 423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462267905615200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |