Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178105.1_202017-04- 21] 633 sequences; 11,613,636 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq262 109 5e-19 seq91 95.1 1e-14 seq7 84.2 2e-11 >seq262 Length=55627 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| ||||| | || || || || |||||||||||||| | | || | || Sbjct 31573 CTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCG 31514 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| |||||||| |||||| | || | | || || || ||||| || ||||| || Sbjct 31513 TCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 31454 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| ||||| ||| || || | ||||| | || ||||| | |||| | Sbjct 31453 TCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATG 31394 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||||||||| || |||||||| ||||| Sbjct 31393 GTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 31359 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 31814 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 31755 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| |||||||| |||||| | || | || ||| || || ||||| Sbjct 31754 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 31695 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || ||||| ||| || || | || || || || || Sbjct 31694 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 31635 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | ||| || ||||||||||| || || || || ||||| Sbjct 31634 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 31587 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | ||| | ||| || ||||| |||||||| ||||| | Sbjct 32042 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 31983 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| |||| | | || || || ||||| Sbjct 31982 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 31923 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| || || || | || || | || || Sbjct 31922 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 31863 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 31862 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 31815 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | ||| | ||| || ||||| |||||||| ||||| | Sbjct 32270 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 32211 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| |||| | | || || || ||||| Sbjct 32210 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 32151 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| || || || | || || | || || Sbjct 32150 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 32091 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 32090 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32043 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || | || || |||| || || || |||||||| ||||| || | Sbjct 32726 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 32667 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| || ||||| |||||| |||| | | |||||||| ||||| Sbjct 32666 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 32607 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| ||| || || | || ||| | || || Sbjct 32606 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 32547 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 32546 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32499 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 32498 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 32439 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| || ||||| || ||| |||| | | ||| || || ||||| Sbjct 32438 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 32379 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || || || || || | || || | || || Sbjct 32378 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 32319 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 32318 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32271 >seq91 Length=281476 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || |||||||||||||||||||| || | Sbjct 249293 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 249352 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 249353 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 249412 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 249413 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 249472 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || |||||||| || || ||| Sbjct 249473 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 249512 >seq7 Length=185784 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | || | || ||||| ||||| |||||||| || | Sbjct 8712 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8653 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || | | || ||||| || || Sbjct 8652 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8593 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 8592 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8533 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||||| ||||| ||||| || |||||||||||||| || Sbjct 8532 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499640846560520