Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178105.1_202017-04-
21] 633 sequences; 11,613,636 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq262 141 7e-29
seq7 131 1e-25
seq91 118 8e-22
seq255 111 1e-19
>seq262
Length=55627
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || ||||| | ||||| ||||| || ||||| |||||
Sbjct 32041 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 31982
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||| | ||| || || || | ||||| | ||||| || |||
Sbjct 31981 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 31922
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| ||||| || | || ||||| ||| | ||| ||
Sbjct 31921 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 31862
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 31861 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 31814
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || ||||| | ||||| ||||| || ||||| |||||
Sbjct 32269 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32210
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||| | ||| || || || | ||||| | ||||| || |||
Sbjct 32209 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 32150
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| ||||| || | || ||||| ||| | ||| ||
Sbjct 32149 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 32090
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 32089 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 32042
Score = 134 bits (148), Expect = 1e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || ||||| ||||| || ||||| |||||||| || |
Sbjct 32497 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--G 32440
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||||| ||| || ||||| | ||||| | |||||| || |
Sbjct 32439 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 32380
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||| || || ||| || ||||| || | || ||||| ||| | ||| |
Sbjct 32379 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32320
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| |||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 32319 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 32270
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || ||||| ||||| || ||||| |||||||| || |
Sbjct 31813 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--G 31756
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||||| || || || || | ||||| | |||||| || |
Sbjct 31755 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 31696
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||||| || || | || || || ||| ||| |
Sbjct 31695 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 31636
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||| || ||||||||||| |||| ||| || ||||| || ||||||
Sbjct 31635 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 31586
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | ||| || || || | ||||| || || || ||||| || ||||| ||
Sbjct 32725 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 32666
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| | ||||||| ||| || || || | ||||| | || ||||| |||
Sbjct 32665 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 32606
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || ||||| || | ||| ||
Sbjct 32605 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 32546
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 32545 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 32498
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| | |||| || | ||| | ||| || || || || |||||||||||
Sbjct 31585 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 31526
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||||| || || || || | ||||| | ||||| || ||
Sbjct 31525 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31466
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || || |||||| | ||| ||
Sbjct 31465 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31406
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 31405 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 31358
>seq7
Length=185784
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || || || ||||| || ||||| |||||||| |||
Sbjct 8711 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8652
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||||
Sbjct 8651 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8592
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| | || ||||| || | ||| ||
Sbjct 8591 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8532
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 8531 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8482
>seq91
Length=281476
Score = 118 bits (130), Expect = 8e-22
Identities = 160/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || ||||| || | || || |||||||| |||||||| || |
Sbjct 249294 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA--G 249351
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 249352 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 249411
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||| || || ||| | || ||||| || | ||| |
Sbjct 249412 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 249471
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
| || || || ||||| ||||| |||| ||| || ||||||
Sbjct 249472 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 249512
>seq255
Length=102211
Score = 111 bits (122), Expect = 1e-19
Identities = 169/241 (70%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| || || ||||| | || || || ||||| |||||||| ||
Sbjct 62031 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 62090
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| |||| ||||||| ||||| || ||||| | ||||| | |||||||| |||
Sbjct 62091 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 62150
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| | || || || || | ||| ||
Sbjct 62151 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 62210
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAAT 15189
|| || || ||||| ||||| |||| ||| || || || | | || | ||| ||||| |
Sbjct 62211 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAGCTGTACAAAATTGGAATAAGT 62270
Query 15190 T 15190
|
Sbjct 62271 T 62271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357389242832405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |