Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178125.1_202017-04- 21] 1,926 sequences; 12,067,595 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1617 199 3e-46 >seq1617 Length=25164 Score = 199 bits (220), Expect = 3e-46 Identities = 550/836 (66%), Gaps = 43/836 (5%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 4020 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 4079 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 | || || ||||||||| | ||| | || || | ||| | || || || Sbjct 4080 TGTTAACTTGAAATCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGG 4139 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 ||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || || Sbjct 4140 TCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGC 4199 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 ||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 4200 ATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCT 4259 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 4260 AGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACG 4319 Query 101833 TTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------ACA 101865 ||| |||| | || ||||| ||| ||| || || Sbjct 4320 TTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACT 4379 Query 101866 GACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||| || || || | ||| || |||||||| ||||||| || || | Sbjct 4380 GACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGG 4439 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATCA 101984 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| | Sbjct 4440 GTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATAA 4498 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCT 102043 |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 4499 CCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTTA 4557 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 4558 GCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCT 4617 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC- 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 4618 TTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACCT 4677 Query 102163 AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCA 102220 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 4678 TGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAGT 4734 Query 102221 ACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAA 102277 | | |||||| ||| || |||| || |||| ||||| || |||| |||| Sbjct 4735 ATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAAA 4794 Query 102278 CTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 ||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 4795 CTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 4850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361242720305426