Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178125.1_202017-04-
21] 1,926 sequences; 12,067,595 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 129 4e-25
seq1039 123 2e-23
seq1859 100 2e-16
>seq1669
Length=310
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| |||||||| || | ||| |||||||| | ||||| || |||
Sbjct 299 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 240
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || || | ||| || || ||||||||||||| ||||||||| | ||
Sbjct 239 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 180
Query 43003 ACACCTTCTTTTTCGCTGATCA-ACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||||||||| || ||| ||| |||||| || ||| |||||| || || ||
Sbjct 179 ATACCTTCTTTATCTTGAATCTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 121
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 120 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 73
>seq1039
Length=72148
Score = 123 bits (136), Expect = 2e-23
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| ||||||||||| | || ||| || || | || ||||| |||
Sbjct 32778 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32719
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| |||| ||| || |||||||||||||||| |||||||| | ||
Sbjct 32718 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 32659
Query 43003 ACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| |||||| || || ||| | ||| |||||| || ||| |||||| || || |
Sbjct 32658 ATACCTTCCTTGTC-TTGAATTTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32601
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 32600 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32552
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/202 (71%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971
|||| ||||||||| | |||||| || |||| || | | || || | ||| || ||
Sbjct 32977 AGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACC 32918
Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA----TCAACT 43027
|||||||||||||| || || || | || | |||||| || || ||| || ||
Sbjct 32917 GGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGAC- 32860
Query 43028 CTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTA 43087
|| || || ||| ||||| || || || |||| |||||||| || || ||||
Sbjct 32859 --TTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTA 32802
Query 43088 GAGTTTTCACAAAAATTTGCAT 43109
||||||| || |||||||||||
Sbjct 32801 GAGTTTTGACGAAAATTTGCAT 32780
>seq1859
Length=318102
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| ||||||
Sbjct 8707 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8648
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 8647 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8588
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||||| || ||| ||||| || || ||
Sbjct 8587 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8528
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 8527 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381360648063708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |