Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178125.1_202017-04- 21] 1,926 sequences; 12,067,595 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1669 131 2e-25 seq1039 125 6e-24 seq1859 123 2e-23 seq837 84.2 2e-11 seq6 82.4 7e-11 >seq1669 Length=310 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | || || || |||||||||||||| || || || | |||| || | Sbjct 287 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 228 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||| || || || | ||||||| || || ||||| || || ||||||||| Sbjct 227 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 168 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || ||||| || | || | ||||||||||| || || || || || | Sbjct 167 TCTTGAATCTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 109 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 108 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 73 >seq1039 Length=72148 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | ||||| ||| || || || || || |||||||| | ||| || Sbjct 32766 CTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 32707 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| ||| || || || | ||||||| ||| || || || ||||| ||||| || Sbjct 32706 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 32647 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| ||||| || | || | ||||||||||| || || || || || | Sbjct 32646 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 32588 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 32587 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32552 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 |||||| || || || || || || |||||||| ||||| || || | ||| || Sbjct 32995 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 32936 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| || Sbjct 32935 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 32876 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 ||||||| |||| | | | || | || | ||||| ||||| || || || || || | Sbjct 32875 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 32817 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 32816 TAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32780 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 ||||| | ||| ||||| | || || ||||| || || || ||||| | ||| || Sbjct 32313 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 32254 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 || || | || || || || | ||||||| ||| || || || || || ||||| Sbjct 32253 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 32194 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || ||||||| |||| | | | || | || | ||| |||||||| || ||||| | || Sbjct 32193 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 32135 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| | ||| || || ||||| ||||| Sbjct 32134 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32096 >seq1859 Length=318102 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 8695 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 8636 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 8635 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8576 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||| ||||| || ||||| || |||| Sbjct 8575 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 8516 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 8515 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8480 >seq837 Length=83407 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | || |||||||||||||| || || || | ||| || Sbjct 21363 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 21304 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || ||||| || Sbjct 21303 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 21244 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| ||||| || ||||| | ||| | Sbjct 21243 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 21184 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331 || || || || | ||| || || || Sbjct 21183 GTCTTACCAGTCAAAGTCTTAACGAA 21158 >seq6 Length=216928 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 |||| |||||||| | ||||| || ||| ||||| || |||| | | | Sbjct 64154 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 64095 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 || ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | || Sbjct 64094 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 64035 Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020 ||||| || ||||| || | |||||||||| ||||| ||| || ||||| | Sbjct 64034 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 63975 Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080 || || |||||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 63974 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 63915 Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140 || || ||| ||| || || || || || ||| || || || ||||||||| Sbjct 63914 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 63855 Query 123141 AAA 123143 ||| Sbjct 63854 AAA 63852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451992318022960