Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178125.1_202017-04- 21] 1,926 sequences; 12,067,595 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq221 86.0 1e-11 >seq221 Length=534030 Score = 86.0 bits (94), Expect = 1e-11 Identities = 345/532 (65%), Gaps = 15/532 (3%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571 ||||||||| ||||| |||||| || | ||||| || | | |||| || | || Sbjct 233660 CTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAA 233719 Query 25572 AGA---CGAGCAGCATTTTC---TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625 || |||| || ||||| || || || | || || || || || ||||| || Sbjct 233720 CGAGAACGAG-AGATTTTTCATTTCCAGA--GTTCTTGCCTTTTTCGCCGCTTCTGACGG 233776 Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 ||| || || || || || || | ||| ||| ||||| || ||||| || Sbjct 233777 TATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAA 233836 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 | |||||||||||||||| || || |||||| | |||||||| || || | | Sbjct 233837 GAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTT 233896 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| || ||||| | ||| || || || |||| |||||| | Sbjct 233897 GATCGAT-ACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACA 233955 Query 25805 ACATACCCAGCATCAAGAG-GAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAG 25862 ||| ||||| | | | |||||| ||||| | | ||||| ||| | | || Sbjct 233956 CCAT-CCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGA- 234013 Query 25863 CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGG 25922 ||| |||||| || | || || |||||||| | | || || |||||||| ||| Sbjct 234014 CGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGG 234073 Query 25923 TTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982 ||| ||||| |||| |||||| | || ||| || | |||||||| | |||||| Sbjct 234074 TTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTC 234133 Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 |||||| | ||| | || ||||| ||| | |||| || ||||| ||| || Sbjct 234134 CAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTTG 234185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928822438061440