Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178125.1_202017-04-
21] 1,926 sequences; 12,067,595 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq6 120 7e-22
seq1 118 3e-21
seq24 95.1 3e-14
>seq6
Length=216928
Score = 120 bits (132), Expect = 7e-22
Identities = 552/866 (64%), Gaps = 20/866 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||| |||||| | |||||| |||||||||| | |||| || | |
Sbjct 64148 TATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTGGCC 64089
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||| | || | | || || | || || || || ||||| |
Sbjct 64088 GAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAG 64029
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | | | | ||| | || ||| || |||| ||
Sbjct 64028 GCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCTCCAACG 63969
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| || || || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 63968 TTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTTGCCATGAA 63910
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || || ||||| || | | || ||| |||| | ||||| ||||
Sbjct 63909 GGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAAC 63850
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| | ||||| |||| || | | || ||
Sbjct 63849 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 63790
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || ||||| |||||||
Sbjct 63789 TACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCG 63730
Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||||| | || ||| | ||||| | || || ||||| ||
Sbjct 63729 TTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATG 63670
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||||||||| || | || || | || || || || | |||| |||
Sbjct 63669 GCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAAT 63613
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| | |||||| | ||| | |||||||| ||||| |
Sbjct 63612 TCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGA 63553
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGATGTAT 110955
||||||||| | ||| | | | | ||| |||| |||||||| || ||| |
Sbjct 63552 AGAAAATGGGACCTGGACATTATTCTCTCCAACATC-AGCTCCTGGTTTAAGCGATTGTT 63494
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCG-CAA 111013
| || | |||||||| | || || || || |||||||| | | | | | |
Sbjct 63493 ACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTGGTAAGACTA 63434
Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073
||| ||| ||| || | |||| || | ||| | ||| ||||||||| ||
Sbjct 63433 TCAA-----AGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTAC 63379
Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133
|||| || | || || ||| | ||| | ||||||||||||| || |||||
Sbjct 63378 ACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGT 63319
Query 111134 AATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 63318 CATCAAGTCATCAAACTTATGCTGTG 63293
>seq1
Length=363725
Score = 118 bits (130), Expect = 3e-21
Identities = 394/607 (65%), Gaps = 7/607 (1%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| || ||||| || || || ||| | || || || | | || || || |
Sbjct 153751 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 153810
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||||||||| || || | | ||||| ||| | ||||| ||||| ||||| ||
Sbjct 153811 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 153870
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | |||| || | || || || | | | | ||| ||| | || ||
Sbjct 153871 TCTGTGCTGAAGACTTATAATTTGATGTCGTTAAGATACTTC-ACTCACGCTTCCCCAAC 153929
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTA 110541
|||| ||||| || || ||| || |||| || |||||| | | || |
Sbjct 153930 TTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATGA 153988
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601
| ||||| ||||| ||||||||||||||| || | |||||| |||| | ||||| ||||
Sbjct 153989 AGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAAA 154048
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
| || || ||||| |||| | | | || || || | ||| | |||||||
Sbjct 154049 CTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATATCGCTG 154108
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || ||| |||||| || | |||| ||| | | || ||||| | |||||
Sbjct 154109 GTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGCCC 154168
Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| | || |||||| |||||| ||| | || || | | | || || |
Sbjct 154169 GTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCAT 154228
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
||||| ||||||| || || || | || | | |||| || || ||||||
Sbjct 154229 GGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATTC 154288
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
| ||| | ||||| || ||| | ||||| | ||| | |||||||||||||||||||
Sbjct 154289 GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAAG 154348
Query 110899 AAAATGG 110905
| ||||
Sbjct 154349 AGGATGG 154355
>seq24
Length=94241
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/175 (73%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | || ||
Sbjct 8379 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 8436
Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003
||||| || ||| | || | || |||| | || | || |||||||||||||
Sbjct 8437 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 8496
Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058
|||| |||||||| ||||||| || ||||| |||||| ||||||| ||| ||
Sbjct 8497 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 8551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186783513168886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |