Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178125.1_202017-04-
21] 1,926 sequences; 12,067,595 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 149 6e-31
seq837 105 6e-18
seq1 105 6e-18
seq1669 96.9 3e-15
>seq1039
Length=72148
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | ||| |||||||| |||||||| || | |
Sbjct 32550 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 32491
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| |||| || ||||||||||| ||||| ||||||| ||| || || | |||
Sbjct 32490 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 32431
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||| || ||| | | | | ||||||| ||||| |||
Sbjct 32430 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 32371
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| |||||||| |||||||| || ||||| ||||||||
Sbjct 32370 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32324
Score = 120 bits (132), Expect = 3e-22
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | |
Sbjct 32778 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32719
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||||
Sbjct 32718 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 32659
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687
| | ||||||| | ||| |||| ||| || |||| | | |||||| ||||| |
Sbjct 32658 ATACCTTCCTTGT-CTTGA-ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32601
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| | || || || || || || | |||||| || || || |||||
Sbjct 32600 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32552
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | |
Sbjct 32322 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 32263
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| || ||||||||||| ||||| ||||| | || || || | |||
Sbjct 32262 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 32203
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||| | | | |||| | | || ||| ||||| ||
Sbjct 32202 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 32144
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || |||||||| |||||||| || || || ||||||||
Sbjct 32143 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32096
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
|| ||||| | |||||||| || | || | || |||||||||||| ||||| ||
Sbjct 33009 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 32950
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| || |||| | || || || |||||||| ||||| ||||| | |||||||| | |
Sbjct 32949 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 32890
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685
|||| | ||||||| | ||| ||| | | | |||| | | ||||| |||||
Sbjct 32889 GGAATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTC 32831
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | || || || || || || | |||||| || || || |||||
Sbjct 32830 AACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32780
>seq837
Length=83407
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || |
Sbjct 21375 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 21316
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| |||| |||||||| ||||| ||||| | || ||||| | ||
Sbjct 21315 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 21256
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | ||||| ||||| ||
Sbjct 21255 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 21196
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| |||||||| || || ||
Sbjct 21195 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 21158
>seq1
Length=363725
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| || || || || || || |||||||||||||| || | |
Sbjct 320001 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 320060
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | ||
Sbjct 320061 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 320120
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | ||||| ||||| ||
Sbjct 320121 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 320180
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| |||||||| || |||||
Sbjct 320181 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 320218
>seq1669
Length=310
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | ||| |||||||| |||||||| || | |
Sbjct 299 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 240
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| | || || || |||||||| ||||| ||||| | ||| || |||| |||
Sbjct 239 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 180
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687
| | || ||| | ||| | || ||| || |||| | | |||||| ||||| |
Sbjct 179 ATAC-CTTCTTTATCTTGA-ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 122
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| | || || || || || || | |||||| || || || |||||
Sbjct 121 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 73
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450782747144080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |