Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04-
21] 1,876 sequences; 11,783,915 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq37 129 5e-25
seq6 104 2e-17
seq429 98.7 8e-16
seq10 93.3 4e-14
>seq37
Length=58421
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| ||||| || || || || || || || ||| | || || || |
Sbjct 25987 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCC 25928
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| |||| || ||| |||||| ||||||||||| |||| |||||
Sbjct 25927 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCA 25869
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| ||| | |||| ||| || || ||| ||||||||| | |||| || | || || ||
Sbjct 25868 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 25809
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| ||||| || |||||| | || |||||||||||||| |||| ||
Sbjct 25808 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 25761
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| ||||| || || || || || || || ||| | || || || |
Sbjct 25303 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCC 25244
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| |||| || ||| |||||| ||||||||||| |||| |||||
Sbjct 25243 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCA 25185
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| ||| | |||| ||| || || ||| ||||||||| | |||| || | || || ||
Sbjct 25184 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 25125
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| ||||| || |||||| | || ||||||||||| || |||| ||
Sbjct 25124 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 25077
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || | || || |||||||| || | || || ||| |
Sbjct 25531 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 25472
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | || || || || ||||| || || ||||| |||| |||||
Sbjct 25471 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 25413
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | |||| ||| || || ||| | ||||| | | ||| || | ||||||||
Sbjct 25412 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 25353
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||| ||||||||||| | ||| |||||||||||||| |||| ||
Sbjct 25352 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 25305
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || | || || |||||||| || | || || ||| |
Sbjct 26215 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 26156
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | || || || || ||||| || || ||||| |||| |||||
Sbjct 26155 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 26097
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | |||| ||| || || ||| | ||||| | | ||| || | ||||||||
Sbjct 26096 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 26037
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||| ||||||||||| | ||| |||||||||||||| |||| ||
Sbjct 26036 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 25989
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || | || || |||||||| || | || || ||| |
Sbjct 26671 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 26612
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | || || || || ||||| || || ||||| |||| |||||
Sbjct 26611 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 26553
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | |||| ||| || || ||| | ||||| | | ||| || | ||||||||
Sbjct 26552 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 26493
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||| ||||||||||| | ||| |||||||||||||| |||| ||
Sbjct 26492 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 26445
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||||||||| || || || || || || || ||| | || || ||
Sbjct 25075 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 25016
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| || ||||| || || |||||| || || ||||| | || || ||
Sbjct 25015 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 24957
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || ||
Sbjct 24956 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 24897
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
|||||||| ||||| ||| | || | || ||||| ||| | || || ||
Sbjct 24896 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 24846
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| ||||| || | || || |||||||| || | ||| || || |
Sbjct 27127 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 27068
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| || | | |||| || || |||||| || || ||||| |||| |||||
Sbjct 27067 GATACCATCG-ACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCA 27009
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | || | ||| || || || ||||||| | | |||| || | || || ||
Sbjct 27008 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 26949
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| ||||| || |||||| | || |||||||||||||| |||| ||
Sbjct 26948 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 26901
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| ||||| || || || || |||||||| || | ||| || ||
Sbjct 26443 ATGCAAATTTTCGTCAAGACACTGACAGGTAAAACCATAACATTGGAAGTTGAATCTTCT 26384
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| | ||||| || || |||||| || || ||||| |||| |||||
Sbjct 26383 GACACT-ATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCA 26325
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | || | ||| || || || ||||||| | | ||| || | ||||| ||
Sbjct 26324 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 26265
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495
|||||| || ||||| || ||||| | |||
Sbjct 26264 CATTCAGAAGGAGTCCACCTTACATCTTGTG 26234
>seq6
Length=231763
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| ||||| || | || || || || |||||| | ||| || ||
Sbjct 8546 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8605
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|||||| || ||||| || || || || || || ||||| | || |||
Sbjct 8606 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 8664
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || || ||||| ||||||| | ||| || |||| ||
Sbjct 8665 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 8724
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| || |||||| |||| |||| ||||||||| |||| ||
Sbjct 8725 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8775
>seq429
Length=245
Score = 98.7 bits (108), Expect = 8e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
|| || ||||| |||| ||||| |||||| | |||| ||| || || ||| | |||
Sbjct 167 GACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAA 108
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|| | | ||| || | |||||||||||||| ||||||||||| | ||| ||||||||
Sbjct 107 GACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 48
Query 115499 AGATTGCGAGGAGG 115512
|||||| |||| ||
Sbjct 47 AGATTGAGAGGTGG 34
>seq10
Length=200488
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
||||||||| || | || || || ||||| || | ||| || || |||||| |
Sbjct 168531 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 168472
Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412
|| |||| || || ||| ||| || || ||||| |||| ||| || ||||||
Sbjct 168471 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 168413
Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472
| || | ||| || || ||||| ||||| | | |||| || | || || ||||||||||
Sbjct 168412 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 168353
Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||| || ||| | || | || ||||||||| |||| ||
Sbjct 168352 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 168313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425334275041120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |