Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq37 129 5e-25 seq6 104 2e-17 seq429 98.7 8e-16 seq10 93.3 4e-14 >seq37 Length=58421 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || || || || ||| | || || || | Sbjct 25987 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCC 25928 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| |||||| ||||||||||| |||| ||||| Sbjct 25927 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCA 25869 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||| ||||||||| | |||| || | || || || Sbjct 25868 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 25809 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 25808 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 25761 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || || || || ||| | || || || | Sbjct 25303 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCC 25244 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| |||||| ||||||||||| |||| ||||| Sbjct 25243 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCA 25185 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||| ||||||||| | |||| || | || || || Sbjct 25184 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 25125 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || ||||||||||| || |||| || Sbjct 25124 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 25077 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || | || || |||||||| || | || || ||| | Sbjct 25531 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 25472 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || || || ||||| || || ||||| |||| ||||| Sbjct 25471 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 25413 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 25412 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 25353 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 25352 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 25305 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || | || || |||||||| || | || || ||| | Sbjct 26215 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 26156 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || || || ||||| || || ||||| |||| ||||| Sbjct 26155 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 26097 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 26096 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 26037 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 26036 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 25989 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || | || || |||||||| || | || || ||| | Sbjct 26671 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 26612 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || || || ||||| || || ||||| |||| ||||| Sbjct 26611 GACAC-GATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 26553 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 26552 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 26493 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 26492 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 26445 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || || || || || ||| | || || || Sbjct 25075 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 25016 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 25015 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 24957 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || || Sbjct 24956 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 24897 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| ||||| ||| | || | || ||||| ||| | || || || Sbjct 24896 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 24846 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| ||||| || | || || |||||||| || | ||| || || | Sbjct 27127 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 27068 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | |||| || || |||||| || || ||||| |||| ||||| Sbjct 27067 GATACCATCG-ACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCA 27009 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || || || ||||||| | | |||| || | || || || Sbjct 27008 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 26949 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 26948 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 26901 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || |||||||| || | ||| || || Sbjct 26443 ATGCAAATTTTCGTCAAGACACTGACAGGTAAAACCATAACATTGGAAGTTGAATCTTCT 26384 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | ||||| || || |||||| || || ||||| |||| ||||| Sbjct 26383 GACACT-ATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCA 26325 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || || || ||||||| | | ||| || | ||||| || Sbjct 26324 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 26265 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||| || ||||| || ||||| | ||| Sbjct 26264 CATTCAGAAGGAGTCCACCTTACATCTTGTG 26234 >seq6 Length=231763 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 8546 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8605 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || || || || ||||| | || ||| Sbjct 8606 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 8664 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||||| | ||| || |||| || Sbjct 8665 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 8724 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || |||||| |||| |||| ||||||||| |||| || Sbjct 8725 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8775 >seq429 Length=245 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 || || ||||| |||| ||||| |||||| | |||| ||| || || ||| | ||| Sbjct 167 GACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAA 108 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || | | ||| || | |||||||||||||| ||||||||||| | ||| |||||||| Sbjct 107 GACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 48 Query 115499 AGATTGCGAGGAGG 115512 |||||| |||| || Sbjct 47 AGATTGAGAGGTGG 34 >seq10 Length=200488 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 ||||||||| || | || || || ||||| || | ||| || || |||||| | Sbjct 168531 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 168472 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || ||| ||| || || ||||| |||| ||| || |||||| Sbjct 168471 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 168413 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||| | | |||| || | || || |||||||||| Sbjct 168412 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 168353 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || ||| | || | || ||||||||| |||| || Sbjct 168352 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 168313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425334275041120