Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq28 264 1e-65 seq10 159 4e-34 >seq28 Length=77188 Score = 264 bits (292), Expect = 1e-65 Identities = 890/1370 (65%), Gaps = 38/1370 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 22749 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 22690 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 22689 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 22633 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 22632 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 22573 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 106189 ||||| || | || || || || | ||| | | ||| | |||||| || ||| Sbjct 22572 GGAGATCCTTGGAAAGTTTCGTATGGACCGTCCCTCTGAGCTAGTTCACAAGAAGCTTCC 22513 Query 106190 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 106249 | ||| || ||||| || ||||||||||| | ||| | | |||||| || ||| Sbjct 22512 ATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAA 22453 Query 106250 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309 ||||||| | || ||| || || || ||||||||||||||||||||| |||| Sbjct 22452 TCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATT 22393 Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369 ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||||| Sbjct 22392 GGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATG 22333 Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429 |||| ||||| ||| ||||||| || | |||||||| | ||||| | | | Sbjct 22332 ACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTAT 22273 Query 106430 GTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATGCC 106474 ||| ||||| |||| ||| || | ||| | ||| | || ||| Sbjct 22272 GTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAGCC 22216 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || || |||||||| || ||||| | ||| ||| || | |||||| || ||||| Sbjct 22215 AAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTT 22156 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || ||| || || || || ||||| ||| ||| |||| || ||||||||||| Sbjct 22155 GATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAA 22096 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCG 106654 | | | | || || || || || || || | | | ||| | | ||| | || | Sbjct 22095 ACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTTTG 22037 Query 106655 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | | | || | || | || || || |||||| || || || || |||||| Sbjct 22036 G--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAAC 21979 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 106773 || ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 21978 TCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAGGT 21920 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 ||| || || || |||||||||||||| || |||||||| || | | || | ||| Sbjct 21919 CCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATC 21860 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGATAT 106892 ||| ||| || || | ||| ||||| || ||| |||| || || | ||||| Sbjct 21859 TCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAAGATAT 21801 Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 106948 | || |||||||| || || || | || | | || |||| | ||| | || Sbjct 21800 CAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCTGG 21742 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | ||||| || || ||| || || || |||| ||| ||||| | ||| | || | Sbjct 21741 TCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTA 21682 Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068 || ||||| || ||| ||| | | | | | | |||||| || | |||||| Sbjct 21681 CCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATA 21622 Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128 || ||||| || || || ||||| ||| | | || | || || || | ||| Sbjct 21621 CCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATA 21562 Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188 ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| ||| Sbjct 21561 GAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCA 21502 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTC 107247 ||||| | ||||| | |||||| | || ||| || | |||||| || || || || Sbjct 21501 TTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTTTC 21443 Query 107248 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 21442 TAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 21393 >seq10 Length=200488 Score = 159 bits (176), Expect = 4e-34 Identities = 872/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| ||| | ||||| | || ||||| ||||||||||||||| Sbjct 2453 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 2394 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | | || | || ||| | || ||| || ||||| Sbjct 2393 ATAGTCAAAGA--GTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTT-TCCCAA 2337 Query 106070 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | |||| ||||||| ||||| | | || | ||| | Sbjct 2336 TCCCACATGCCAAATGGTTTAGCGTTCC-ACATATCGAATTGTAAAATACCCTTGGAAGC 2278 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 |||||||| ||||| || ||| ||||| || |||||||||||| || || Sbjct 2277 TGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTC 2218 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || || || || ||||| ||||| | || | | ||||| ||||| Sbjct 2217 AAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCTGA 2158 Query 106249 ATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | |||| || ||| ||| | ||| || | ||| || ||||| | | ||| Sbjct 2157 TTCAAA-GGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAA 2099 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGT 106364 ||||||| || |||||| || |||| || ||| ||| ||||| |||| | || Sbjct 2098 TAGGTCTATGCTTCATATTTGAATTTC---TAGCCTCGGGAACTGGATAGTAATTACGGT 2042 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | || |||| ||| | || | ||||| | || | || || || | | | || ||| Sbjct 2041 CGATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAAT 1982 Query 106425 CAAA------AGTGCGAGTCTCTT------CATTGACATACTTTGGAAGGGCGATTGATG 106472 | | ||| | |||| | | || | || ||||| || || | Sbjct 1981 TATAGCTTGCAGTTTTACCATCTTCTGAAACCTCAACGAATGCCGGTAGGGCAATAGAAG 1922 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | ||||| ||||| || || |||||| | || || | ||||| ||| |||| Sbjct 1921 CTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGT 1862 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || || || || || || |||| |||||| |||| |||| || || ||||| | Sbjct 1861 TAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTAT 1802 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACACATCG 106651 | | |||| | || || || || || ||||||| |||| | ||| || | ||||| | Sbjct 1801 AAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAATGGCATACCACAACTTT 1743 Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 ||| | ||| | || | || || || ||||| || || || ||||| Sbjct 1742 TGGGC---TTTAATTGTTTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCA 1686 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC-AGAAAAGAGACCA 106770 || || |||||| | | || | |||||| | | |||| | | || | || ||| Sbjct 1685 AATTCATCACCCCACACATCATCTAAACCTGG-GGCAGCACTGGGCGAAAATAAAGTCCA 1627 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| |||| | ||| || ||||||||||| || || ||||| || | | || | Sbjct 1626 AGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAA 1567 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 |||||| ||| ||||| | ||| || | || | || | || || | ||| Sbjct 1566 ATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGAT 1507 Query 106891 ATCCGCGTGCCATGGCT-CAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 106945 ||| || |||||||||| ||||| | | |||| || || || | | ||| | Sbjct 1506 ATCTGCATGCCATGGCTCCAAGA-AAAGGGCGAAAGCACCAGGTCTCTTG-TTACCACCC 1449 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || || || || || |||| ||| ||||| | || | ||| Sbjct 1448 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 1389 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 ||| || || || ||| ||| ||| | | | | ||| || | ||| Sbjct 1388 GTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCA 1329 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 | ||| || || || || ||| ||||| || | | ||| |||| ||||| | | Sbjct 1328 ACACCACCTGCAGTTTTGGAAATTATAGCACATTCTTTCAAAGTATCATAAATACCTTCG 1269 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||||| ||||| |||| || | ||| || ||||| || || ||| |||||| Sbjct 1268 ATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCA 1209 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | |||||| |||| || ||| |||||| | || || Sbjct 1208 GCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA-GTATCTTAACGACATCAAATTATAAGT 1150 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || ||||| || || || || ||||| || | ||||||||||| Sbjct 1149 CTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 1099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966964950240