Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=334526 Score = 111 bits (122), Expect = 2e-19 Identities = 178/251 (71%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 |||||||| | | || ||||| || ||||||||||| ||||||||||||| ||| Sbjct 31704 CCAGAAATGTTGGGAGGTAGAGTGAAAACTTTACATCCTGCCGTTCATGGTGGTATCCTT 31763 Query 151039 GCACAACGAGGTAATTC--TAGTCATGATTTAGATCTTAAGGTAAATCGTATTGAAC--- 151093 || ||| | || ||| |||| ||| | |||| | | | |||||| Sbjct 31764 GCT-----AGGGACATCGATAGCGATGAGAAAGACTTGAAGGAACAGCACATTGAAAAAG 31818 Query 151094 -CGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGT 151152 ||||| || | ||| ||||| |||||| ||||| ||||||||||||||||| ||| Sbjct 31819 TCGATT-ATGTCGTT--TGTAA-CCTATACCCATTCAAAGAAACTGTTGCTAAGGTGGGT 31874 Query 151153 GTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCA 151212 || ||| || |||||||| | || | ||||| ||||||||| || | | ||||| || Sbjct 31875 GTGACTATTCCAGAAGCAGTAGAAGAAATTGATATTGGTGGTGTTACTCTATTAAGAGCA 31934 Query 151213 GCAGCAAAGAA 151223 || || ||||| Sbjct 31935 GCTGCTAAGAA 31945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582834332214400