Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq561 161 1e-34 >seq561 Length=46774 Score = 161 bits (178), Expect = 1e-34 Identities = 360/537 (67%), Gaps = 9/537 (2%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| || |||||||| || || |||||||| ||||||| |||||||| || ||| Sbjct 39118 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 39059 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 |||||||| || ||||| | |||||| ||||| | ||| || || | ||||| || || Sbjct 39058 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 38999 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || || || | |||||||| | ||||| || || || | | ||| || | | Sbjct 38998 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 38939 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTC---AATTGTT 37403 || ||||||| || | ||| || ||||| | | | ||| || || Sbjct 38938 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTT---CTCACCGATTTCTGGGATGGTG 38882 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||| || || || | || | |||||| | || | || |||||||| || | Sbjct 38881 TGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAAC 38822 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || |||||||||||||||||||||| || || ||||| || |||| | | Sbjct 38821 AAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTT 38762 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 || || | | ||| || ||| | | || | | | | |||||||||||||| || || Sbjct 38761 GCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCG 38702 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA 37641 ||| ||| || || || |||||||| || ||| ||| || | | || || Sbjct 38701 TCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATT 38642 Query 37642 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || ||||| |||| ||||| || || ||||||| ||| ||| ||||||| ||| Sbjct 38641 CTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 38585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592302910171040