Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04-
21] 1,876 sequences; 11,783,915 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq37 138 7e-28
seq429 113 3e-20
seq10 93.3 3e-14
seq6 93.3 3e-14
>seq37
Length=58421
Score = 138 bits (152), Expect = 7e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 25304 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 25363
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||||||||| | || |||||| | ||
Sbjct 25364 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 25423
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 25424 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 25482
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| || || || || |||||||||||||||
Sbjct 25483 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 25532
Score = 138 bits (152), Expect = 7e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 25988 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 26047
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||||||||| | || |||||| | ||
Sbjct 26048 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 26107
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 26108 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 26166
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| || || || || |||||||||||||||
Sbjct 26167 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 26216
Score = 138 bits (152), Expect = 7e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 26444 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 26503
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||||||||| | || |||||| | ||
Sbjct 26504 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 26563
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 26564 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 26622
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| || || || || |||||||||||||||
Sbjct 26623 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 26672
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 26900 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 26959
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 26960 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 27019
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| |
Sbjct 27020 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 27078
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || || || || || || |||||||||
Sbjct 27079 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 27128
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| | || || | || |||||| ||| ||||| || ||||| ||
Sbjct 24845 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 24904
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || || | | || || | ||| || |||||||||||||| | ||||| ||| |
Sbjct 24905 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 24964
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697
|| | |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||
Sbjct 24965 AGGAATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCAGAAGATT 25023
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | || || || |||||||| | || || ||||| || ||||||
Sbjct 25024 CAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 25076
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| ||
Sbjct 25532 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 25591
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 25592 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 25651
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||| |
Sbjct 25652 AATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATAGTGTCAGAAGATTCAA 25710
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || ||||| || ||||||
Sbjct 25711 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 25760
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 25760 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 25819
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || | ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 25820 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 25879
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || |||||| ||| || | ||| | |||||| ||||| |
Sbjct 25880 GATACCTTCTTTATCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 25938
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || || || || ||||||
Sbjct 25939 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 25988
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| ||
Sbjct 26216 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 26275
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 26276 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 26335
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||| |
Sbjct 26336 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATAGTGTCAGAAGATTCAA 26394
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || ||||||||||| | || || || || || ||||||
Sbjct 26395 CTTCCAATGTTATGGTTTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 26444
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| ||
Sbjct 26672 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 26731
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || | || || |||||||| ||||| | || |||||| | ||
Sbjct 26732 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 26791
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||| |
Sbjct 26792 AATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATAGTGTCAGAAGATTCAA 26850
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || ||||| || ||||||
Sbjct 26851 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 26900
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| | |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 25076 ACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 25135
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || | ||| || || ||||||||||| | ||| ||||| | ||
Sbjct 25136 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 25195
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || |||||| ||| || | ||| | |||||| ||||| |
Sbjct 25196 GATACCTTCTTTATCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 25254
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || |||||||| | || || || || || ||||||
Sbjct 25255 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 25304
>seq429
Length=245
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| | || |||||| || ||||| ||||| ||
Sbjct 33 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 92
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| |||| ||| || |||||||||||||| | || |||||| | ||
Sbjct 93 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 152
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | | ||| | || | |||||| ||||| |
Sbjct 153 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 211
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTT 33734
| || | ||||| |||||||| || || || ||
Sbjct 212 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTT 245
>seq10
Length=200488
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || || | |||| |||||||| |||||||| || ||
Sbjct 168312 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 168371
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | || || || | ||
Sbjct 168372 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 168431
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | |||| ||| | ||||| ||||| |
Sbjct 168432 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 168490
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 168491 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 168530
>seq6
Length=231763
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| |||||||| || ||||| |||||||| ||||
Sbjct 8777 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 8718
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || |||||||| || || ||||| ||||| | || || || | |
Sbjct 8717 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8658
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||| |||||
Sbjct 8657 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 8599
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| ||||| || || || || || |||||
Sbjct 8598 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328696484593920
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