Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq37 102 8e-17 >seq37 Length=58421 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | || || ||||| ||||||||||| || ||| | Sbjct 26909 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCT 26968 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||||| ||||| ||||||| | |||| | | |||||||||||||| || ||||| Sbjct 26969 ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTC 27028 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || |||||| || | | || | ||||||| | || ||||| | || Sbjct 27029 CTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 27088 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 | |||||||| |||| ||| || | |||||||||||| | |||||| Sbjct 27089 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 27137 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | || || ||||| ||||||||||| || ||| | Sbjct 25769 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCT 25828 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || ||||| | | | || | | ||||||||| ||||| || ||||| Sbjct 25829 ACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTC 25888 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| |||||| ||| | | || | ||| |||| | || || || | || Sbjct 25889 TTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGT 25948 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || ||||| ||||| || || | |||||| ||||| Sbjct 25949 TATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 25987 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| ||||| || | | || || ||||| ||||||||||| || ||| | ||| Sbjct 25091 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 25150 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || || ||||| | | | || | | ||||||||| ||||| || ||||||||||| Sbjct 25151 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 25210 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | || | ||| |||| | || || || | || | || Sbjct 25211 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 25270 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || || | |||||| ||||| Sbjct 25271 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 25303 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||||| | | ||||| || ||||||||||| || || || | ||||| ||||| Sbjct 26240 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 26299 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||| | |||| | | |||||||||||||| || ||||| || || |||||| Sbjct 26300 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 26359 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 || | | || | ||| || | | || ||||| | || | |||||||| || Sbjct 26360 CGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACTTCCAATGTTATGGTTTTACCTGT 26419 Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123 ||| || || | |||||| ||||| Sbjct 26420 CAGTGTCTTGACGAAAATTTGCAT 26443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476600023467360