Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq37 143 2e-29 seq429 125 6e-24 seq34 105 6e-18 seq10 105 6e-18 >seq37 Length=58421 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 25305 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 25364 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||| Sbjct 25365 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGG 25424 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 25425 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 25484 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 25485 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 25531 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 25989 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 26048 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||| Sbjct 26049 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGG 26108 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 26109 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 26168 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 26169 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 26215 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 26445 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 26504 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||| Sbjct 26505 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGG 26564 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 26565 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 26624 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 26625 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 26671 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || | ||| |||||||| |||||||| || | | Sbjct 26901 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 26960 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| || ||||||||||| ||||| ||||| | || || || | ||| Sbjct 26961 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27020 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | || ||| ||||| || Sbjct 27021 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 27079 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || |||||||| |||||||| || || || |||||||| Sbjct 27080 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27127 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | | Sbjct 25533 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 25592 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||||||||| ||||| ||||| | || || || | |||| Sbjct 25593 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 25652 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | ||||| ||||| || Sbjct 25653 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 25711 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 25712 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 25759 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | | Sbjct 26673 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 26732 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||||||||| ||||| ||||| | || || || | |||| Sbjct 26733 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 26792 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | ||||| ||||| || Sbjct 26793 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 26851 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 26852 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 26899 Score = 102 bits (112), Expect = 7e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || | ||| |||||||| |||||||| || | | Sbjct 25761 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 25820 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| | || || || |||||||| ||||| ||||| | ||| || |||| ||| Sbjct 25821 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 25880 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687 | | || ||| | ||| |||| ||| || |||| | | |||||| ||||| | Sbjct 25881 ATAC-CTTCTTTATCTTGA-ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 25938 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| | || || || ||||| |||| || || || || || ||||| Sbjct 25939 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 25987 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | | Sbjct 26217 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 26276 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||||||||| ||||| ||||| | || || || | ||| Sbjct 26277 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 26336 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | ||||| ||||| || Sbjct 26337 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 26395 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || |||||||| |||| || || || || || ||||| Sbjct 26396 TTCCAATGTTATGGTTTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 26443 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 ||||||||||| || | ||| |||||||| |||||||| || | |||||||| | Sbjct 25089 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 25148 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || || |||||||| ||||| ||||| | ||| || |||| ||| | | || ||| Sbjct 25149 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC-CTTCTTT 25207 Query 35642 TCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 | ||| |||| ||| || |||| | | |||||| ||||| ||||| | || | Sbjct 25208 ATCTTGA-ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTA 25266 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || ||||| |||| || || || || || ||||| Sbjct 25267 TAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 25303 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || ||||| | |||||||| || | || | || |||||||||||| ||||| || Sbjct 24846 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 24905 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || |||| | || || || |||||||| ||||| ||||| | |||||||| | | Sbjct 24906 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 24965 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685 |||| | ||||||| | ||| ||| | | | |||| | | ||||| ||||| Sbjct 24966 GGAATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTC 25024 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 25025 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 25075 >seq429 Length=245 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 34 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 93 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||| Sbjct 94 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGG 153 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 154 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 213 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 || | ||||| |||||||| |||||||| || Sbjct 214 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTT 245 >seq34 Length=66688 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || | Sbjct 3585 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 3526 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 3525 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 3466 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 3465 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 3406 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || || || Sbjct 3405 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 3368 >seq10 Length=200488 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| || || || || || || |||||||||||||| || | | Sbjct 168313 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 168372 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 168373 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 168432 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 168433 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 168492 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || ||||| Sbjct 168493 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 168530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450783028890080