Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178135.1_202017-04- 21] 1,876 sequences; 11,783,915 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq28 295 8e-75 >seq28 Length=77188 Score = 295 bits (326), Expect = 8e-75 Identities = 907/1387 (65%), Gaps = 38/1387 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 22768 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 22709 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 22708 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 22651 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 22650 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 22592 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | ||||| || || ||||| || | || ||||| || | ||| | | ||| Sbjct 22591 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCCTCTGAGC 22532 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | |||||| || |||| ||| || ||||| || ||||||||||| | ||| | Sbjct 22531 TAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAG 22472 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 | |||||| || |||||||||| | || ||| || || || |||||||| Sbjct 22471 CAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACC 22412 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGG 111123 ||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| || Sbjct 22411 TTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGG 22352 Query 111124 ATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG 111183 || |||| | |||||||||| ||||| ||| ||||||| || | |||||||| Sbjct 22351 GTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATG 22292 Query 111184 AAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATACTT 111228 | ||||| | | | ||| ||||| |||| ||| || | Sbjct 22291 TAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC-- 22235 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || | Sbjct 22234 TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAAC 22175 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 |||||| |||||||| || ||| || || || || ||||| ||| || | Sbjct 22174 AATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCT 22115 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || ||||||||||| | | | | || || || || || || || | || | ||| Sbjct 22114 GTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAAT 22055 Query 111409 AGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 | | ||| | || || | | || | || | || || || |||||| Sbjct 22054 GGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCG 21998 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTG 111527 || || || || |||||||| ||||| ||| | ||| || || ||| || Sbjct 21997 GGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TG 21939 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 || |||| | | ||| ||| ||| || || |||||||||||||| || ||||||| Sbjct 21938 GAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCC 21879 Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-C 111646 | || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 21878 ATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATA 21820 Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---- 111702 |||| || || | |||||| || |||||||| || || || | || | | || Sbjct 21819 TCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGT 21760 Query 111703 CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 |||| | ||| | || | ||||| || || ||| || || || |||| ||| || Sbjct 21759 CTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGG 21701 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822 ||| | ||| | || ||| ||||| || ||| ||| | | | | | | Sbjct 21700 AATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTT 21641 Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 |||||| || | |||||||| ||||| || || || ||||| ||| | | || Sbjct 21640 ATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGT 21581 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| || Sbjct 21580 GTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTG 21521 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGG 112001 ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | | Sbjct 21520 AGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAG 21462 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 ||||| || || || || || ||| || || ||| ||||||||||| | ||||| Sbjct 21461 ACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGA 21402 Query 112062 CCCGCAT 112068 | | ||| Sbjct 21401 CTCTCAT 21395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628017272649600