Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178145.1_202017-04- 22] 2,876 sequences; 12,267,831 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2480 127 4e-24 seq44 120 6e-22 >seq2480 Length=226909 Score = 127 bits (140), Expect = 4e-24 Identities = 230/335 (69%), Gaps = 20/335 (6%) Strand=Plus/Minus Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 |||||||||| || |||| | || ||| | || | || ||| ||| |||||| || Sbjct 120717 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 120659 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 || |||| ||| || | | ||||| | ||||| || |||||| | || ||||| Sbjct 120658 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTAGGGCCCGTT 120599 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473 || ||||| |||||| | |||||||||||| |||| | || || | ||| |||||| Sbjct 120598 TATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 120539 Query 35474 GGAAAGGGTATTGATCAATTG-GCCA--------ATATACTAAAGACCCTGAGAGAAAAT 35524 ||| | ||||||||||||||| || ||| ||||||||| |||| Sbjct 120538 GGACAAGGTATTGATCAATTGAAACAGGTTATTCATAAACTAAAGAC---------AAAT 120488 Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584 || | |||||||| || ||||||| || ||||| || ||| || || |||||| Sbjct 120487 CCCTACGATAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCT 120428 Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 | || |||||||| || | | || || ||||| Sbjct 120427 TTGCCGCCATGCCATATTTTTTCACAGTTCTATGT 120393 >seq44 Length=37901 Score = 120 bits (132), Expect = 6e-22 Identities = 296/444 (67%), Gaps = 15/444 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| | ||||||| |||| || ||| | || || |||||||||||| Sbjct 37383 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 37442 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||||| |||| ||| | |||| ||||| || || || | ||| ||| Sbjct 37443 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 37502 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || ||||||||||||| || |||| | |||| || | | Sbjct 37503 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 37555 Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | ||| || ||| ||| |||||||||| || || || |||||||||| || Sbjct 37556 ACCAGACCCAGCCATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 37615 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 || | || | || ||| || | || |||||| | || |||| ||| || Sbjct 37616 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 37675 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271 | |||| | || || || | ||| ||||| | | || || ||||| |||| || Sbjct 37676 CGTTGAGTACGTCGCCGACAGACTGTTGGTCGCTTTCGGTAACAAGAAA--TACTACAAG 37733 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331 || ||||||||| |||||||| || || ||| | | |||||| ||||| || Sbjct 37734 GTCGAAAACCCCTTCGATTTCATGGAAAACATATCCTTGGCCGGTAAGACTAACTTCTTC 37793 Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355 ||||||||||| | || || ||| Sbjct 37794 GAAAAGAGAGTTTCTGACTACCAA 37817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989547535066580