Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178145.1_202017-04-
22] 2,876 sequences; 12,267,831 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq36 143 2e-29
seq2480 93.3 3e-14
>seq36
Length=53341
Score = 143 bits (158), Expect = 2e-29
Identities = 449/690 (65%), Gaps = 34/690 (5%)
Strand=Plus/Plus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303
|| || ||| |||||||||| || |||| || | ||||| |||| |||| | |||
Sbjct 5702 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 5761
Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360
|| | ||| | || || || |||| | |||||| || |||||| |
Sbjct 5762 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 5815
Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
| || || || ||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 5816 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 5875
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || |||||||| ||||| || | ||| || || |||
Sbjct 5876 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGTAAGTACGTTGGTTCT 5932
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| |||||||| | || ||| ||| || || |||| |||| | | || | |
Sbjct 5933 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 5992
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || ||| || || ||||| || | ||||| |||| | | | ||||
Sbjct 5993 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 6047
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | ||| ||| |||| ||| || |||||| | |
Sbjct 6048 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 6107
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | ||| ||||||||||||| |||||||| ||||| ||| |
Sbjct 6108 CTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 6167
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||||||||| || | || || || ||| | || ||| | | | ||||||
Sbjct 6168 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 6227
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825
| |||||||||||| ||| | | ||||||| |||| || || | ||| |
Sbjct 6228 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 6287
Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
||||||| | | | |||||||| | ||| || | || || || |||||||
Sbjct 6288 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 6347
Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
|| || || ||||||| |||||||
Sbjct 6348 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 6377
>seq2480
Length=226909
Score = 93.3 bits (102), Expect = 3e-14
Identities = 171/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
|| ||||| |||||| ||| | || |||| ||||| | || || || ||||||||
Sbjct 120352 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 120293
Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222
|| |||||| || | || |||||||| | ||| | | | | || |||||
Sbjct 120292 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 120233
Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282
|| |||| || || || |||| |||| |||| | | ||||| || | || | ||||
Sbjct 120232 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 120173
Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342
||| | | |||| || |||||||| || | ||| |||||| | | ||| || ||
Sbjct 120172 CAAATCTCCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTTAAAGAC 120113
Query 41343 ATTGATGATTT 41353
|||||||||||
Sbjct 120112 ATTGATGATTT 120102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397442068670380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |