Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178145.1_202017-04-
22] 2,876 sequences; 12,267,831 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq44 136 4e-27
>seq44
Length=37901
Score = 136 bits (150), Expect = 4e-27
Identities = 565/880 (64%), Gaps = 31/880 (4%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| ||||| || || ||| | ||||||| || || |||||||| |
Sbjct 37832 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 37773
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTA--GAA---GTATTATATACAGCTTTA 23319
|| ||||| |||||||| ||||| || || || || ||| ||| | | |||
Sbjct 37772 CAAGGATATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG--TTA 37715
Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379
| | || || || || || || || | |||| ||||| ||| || |||
Sbjct 37714 CCGAAAGCGACC---AACAGTCTGTCGGCGACGTACTCAACGTATTGGTTCATTAAGTCA 37658
Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439
||| ||||||| | ||||| | || || | ||| || || ||||||
Sbjct 37657 GCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCC 37598
Query 23440 ACAGCATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496
||||| || | |||| ||| |||||| || || ||| | || ||||
Sbjct 37597 ACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGG 37541
Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556
||||| || |||||||| || || | ||||| || |||| |||||||| ||
Sbjct 37540 GCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTG 37481
Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616
||||| ||||| || ||||| | |||| ||||| | ||| || || | ||||| ||
Sbjct 37480 GAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAA 37421
Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676
||||| || || | ||| |||| | |||||||| || || | | |||||| ||
Sbjct 37420 CCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCG 37361
Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTC----AAT 23732
| | || ||||||| || | ||| | |||||| | || | | |||
Sbjct 37360 TCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGAAT 37305
Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAAT 23792
|| | ||| || || || | || |||||| | || | || || ||||| ||
Sbjct 37304 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 37245
Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852
| || || ||||||| |||||||||||||| || || || || || ||||
Sbjct 37244 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 37185
Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912
| || || | | ||| || || | | || ||| | | || ||||| ||||||||
Sbjct 37184 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 37125
Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAG 23968
||| ||| ||| || || || |||||||| || ||||| ||| ||| || |
Sbjct 37124 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-G 37067
Query 23969 TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027
|| || | || ||||| |||| ||||| || || ||||||| ||| ||| | |||||
Sbjct 37066 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 37007
Query 24028 AAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
||| || ||||||||| || | |||| || ||||
Sbjct 37006 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 36967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521469252506400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |