Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178145.1_202017-04- 22] 2,876 sequences; 12,267,831 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq44 136 4e-27 >seq44 Length=37901 Score = 136 bits (150), Expect = 4e-27 Identities = 565/880 (64%), Gaps = 31/880 (4%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| ||||| || || ||| | ||||||| || || |||||||| | Sbjct 37832 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 37773 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTA--GAA---GTATTATATACAGCTTTA 23319 || ||||| |||||||| ||||| || || || || ||| ||| | | ||| Sbjct 37772 CAAGGATATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG--TTA 37715 Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379 | | || || || || || || || | |||| ||||| ||| || ||| Sbjct 37714 CCGAAAGCGACC---AACAGTCTGTCGGCGACGTACTCAACGTATTGGTTCATTAAGTCA 37658 Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439 ||| ||||||| | ||||| | || || | ||| || || |||||| Sbjct 37657 GCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCC 37598 Query 23440 ACAGCATCTTT---AATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATAC 23496 ||||| || | |||| ||| |||||| || || ||| | || |||| Sbjct 37597 ACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGG 37541 Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 ||||| || |||||||| || || | ||||| || |||| |||||||| || Sbjct 37540 GCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTG 37481 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 ||||| ||||| || ||||| | |||| ||||| | ||| || || | ||||| || Sbjct 37480 GAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAA 37421 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 ||||| || || | ||| |||| | |||||||| || || | | |||||| || Sbjct 37420 CCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCG 37361 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTC----AAT 23732 | | || ||||||| || | ||| | |||||| | || | | ||| Sbjct 37360 TCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGAAT 37305 Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAAT 23792 || | ||| || || || | || |||||| | || | || || ||||| || Sbjct 37304 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 37245 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 | || || ||||||| |||||||||||||| || || || || || |||| Sbjct 37244 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 37185 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | || || | | ||| || || | | || ||| | | || ||||| |||||||| Sbjct 37184 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 37125 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCAG 23968 ||| ||| ||| || || || |||||||| || ||||| ||| ||| || | Sbjct 37124 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC-G 37067 Query 23969 TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027 || || | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| Sbjct 37066 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 37007 Query 24028 AAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 ||| || ||||||||| || | |||| || |||| Sbjct 37006 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 36967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521469252506400