Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178155.1_202017-04-
21] 1,296 sequences; 11,857,839 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq46 105 7e-18
seq583 95.1 1e-14
seq916 86.0 7e-12
seq652 86.0 7e-12
>seq46
Length=32793
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||| || | || |||||||| || ||||| ||||
Sbjct 32731 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 32672
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| ||||||||||||||||| || || | | ||| || || | ||
Sbjct 32671 CAAGGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAGATCAACCTCTGTTGATCTGGAGG 32612
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||||| |||||| || | | | | ||||||| ||||| ||
Sbjct 32611 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 32552
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||||||||| || || | ||||| |||||||| |||||
Sbjct 32551 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32504
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||||| | | ||| | ||| || ||| |||||| ||||| ||||||||||
Sbjct 32503 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 32444
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| |||||||||||||| || || || | || || || || | ||
Sbjct 32443 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 32384
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | || ||| ||||| |
Sbjct 32383 GATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 32325
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || |||||||| || || | ||||| || || || |||||
Sbjct 32324 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32276
>seq583
Length=290
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||||||||| || ||| || ||||| || |||||||
Sbjct 63 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 122
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| || || |||||||| || || || | || || || || | ||
Sbjct 123 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 182
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| ||| ||| | | | |||||| ||||| |
Sbjct 183 AATACCTTCCTTGT-CTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 241
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || ||||| || || || || ||||||||
Sbjct 242 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 290
>seq916
Length=64107
Score = 86.0 bits (94), Expect = 7e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | ||| |||||||| || ||| |||||||| || ||||| ||||
Sbjct 37231 ACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 37290
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | ||||||||||| || || | || || ||||| | |||
Sbjct 37291 TAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 37350
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| || |||| | | | ||||| ||||| ||
Sbjct 37351 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 37410
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAG 42200
|| | |||||||| || || || | ||||| || |||
Sbjct 37411 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 37450
>seq652
Length=44880
Score = 86.0 bits (94), Expect = 7e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || || | ||| || | || | ||| |||||||||||||||||| || |
Sbjct 456 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 397
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | | || ||||| |||||||| || || || | || |||||||| | ||
Sbjct 396 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 337
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| |
Sbjct 336 AATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 278
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| ||||||||
Sbjct 277 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543203999952640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |