Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178155.1_202017-04-
21] 1,296 sequences; 11,857,839 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq652 122 2e-22
seq46 114 3e-20
seq21 105 2e-17
seq916 95.1 3e-14
seq55 86.0 1e-11
>seq652
Length=44880
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||||||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 443 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 384
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || ||||| ||||| || || | | |||||||| ||| ||| |||||
Sbjct 383 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 324
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| || ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 323 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 264
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || |||||||||||
Sbjct 263 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 232
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 216 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 157
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| || ||||| || || || || | | ||| || |||||| || ||||||
Sbjct 156 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 97
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| |||||||| || ||| || | ||||| | | ||| || || | || ||
Sbjct 96 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 37
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || |||||||| || ||||||||
Sbjct 36 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 4
>seq46
Length=32793
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 32719 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 32660
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||| |||||||| || || ||||| | | ||| || || ||| || |||||
Sbjct 32659 GTCTTCTAGCTGCTTACCAGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 32600
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| || || ||| ||| |||| ||||| | | ||| || || || |||||
Sbjct 32599 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 32540
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | ||| || ||||| || ||
Sbjct 32539 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 32507
>seq21
Length=121191
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 119847 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 119906
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 119907 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 119966
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 119967 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 120026
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 120027 GGTCTTACCAGTCAAAGTCTTGACAAAA 120054
>seq916
Length=64107
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || ||
Sbjct 37243 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 37302
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 37303 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 37362
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || ||||| |||||
Sbjct 37363 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 37422
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 37423 GGTCTTACCAGTCAAAGTCTTAACGAA 37449
>seq55
Length=23887
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| |||| ||||||
Sbjct 14007 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 13948
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || || |||||||| ||| | || ||||||
Sbjct 13947 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 13913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178902024006832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |