Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178155.1_202017-04-
21] 1,296 sequences; 11,857,839 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq46 165 7e-36
seq55 150 2e-31
seq652 149 6e-31
seq583 143 2e-29
seq21 109 5e-19
seq916 104 2e-17
>seq46
Length=32793
Score = 165 bits (182), Expect = 7e-36
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || | ||||||||||| || || | || || ||| || ||
Sbjct 32504 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 32563
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| ||||| ||||| ||||| || ||||| |||||
Sbjct 32564 GACACGATCGATAACGTTAAGTCGAAA-ATCCAGGACAAGGAAGGTATCCCTCCAGATCA 32622
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||||||||| || || ||||| || || |||| | |||| || || ||
Sbjct 32623 ACAGAGGTTGATCTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 32682
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||||||| ||||| | || ||
Sbjct 32683 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 32730
Score = 127 bits (140), Expect = 2e-24
Identities = 156/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | ||||||||||| || || | ||||| ||| | ||
Sbjct 32276 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 32335
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| | ||| || |||||||| ||||| || ||||| |||||
Sbjct 32336 GATACCATCGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGATCA 32394
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | |||||||||||||| || ||||| || || |||| |||| ||||| ||
Sbjct 32395 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 32454
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||| ||||| || || |||| ||||
Sbjct 32455 CATTCAGAAGGAGTCCACCTTACATCTTG 32483
>seq55
Length=23887
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || |||||||||| |||||||| || ||||| ||| | |
Sbjct 14129 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 14070
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 14069 TGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 14010
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || || || |||| ||| |||| |||| || || ||
Sbjct 14009 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 13950
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| ||||||||||| || ||||||||||| ||| ||||| | || || ||
Sbjct 13949 CATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTGG 13899
>seq652
Length=44880
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| ||||| || || ||||| || || || || ||| | ||
Sbjct 1 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 60
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| ||||| |||||||| || ||||| ||||||
Sbjct 61 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 120
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||| || || || || || ||| |||| | |||| || || |||
Sbjct 121 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 180
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||||||||| || || |||||||||||| ||||| | || ||
Sbjct 181 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 227
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || || || ||||| ||||| || || || || ||| | |
Sbjct 229 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 288
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| || |||||||| ||||| || ||||| || ||
Sbjct 289 GACACTATTGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCA 347
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| |||||||| || || || || ||| |||| |||| || || ||
Sbjct 348 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 407
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || ||| | || ||| | ||| | || ||
Sbjct 408 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 455
>seq583
Length=290
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| ||||| || || ||||| || || || || ||| | ||
Sbjct 290 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 231
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| |||| ||| || |||||||| ||||| || ||||| |||||
Sbjct 230 GACACTATTGACAACGTCAAAAGTAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGATCA 172
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||| |||||||| || || ||||| || |||| |||| ||||||||
Sbjct 171 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 112
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| || || || || | || ||||||||| ||||| | || ||
Sbjct 111 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64
>seq21
Length=121191
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| ||||| || || || | ||||| ||| | | ||||| | || | || || |
Sbjct 120038 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCA 119979
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || || || || |||||| | ||||||||||| || ||
Sbjct 119978 AAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 119919
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||| || |||| | |||| || || ||||||||||| ||||| || | |||
Sbjct 119918 CAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACTTTGCAC 119859
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||| ||||| | || ||
Sbjct 119858 TTAGTCTTGAGATTGAGAGGTGG 119836
>seq916
Length=64107
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776
|||| || | || ||||| || || || | ||||| ||| | | ||||| | || |
Sbjct 37445 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 37386
Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836
|| || |||||||||||||| ||||| || || || || |||||| | |||||||
Sbjct 37385 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 37326
Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896
|||| || || || |||| || |||| | || || || ||||| ||||||||||
Sbjct 37325 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAAT 37266
Query 24897 CGACACTACACTTGGTGTTGCGATT 24921
| || |||| ||||| ||| ||||
Sbjct 37265 CCACTTTACATTTGGTCTTGAGATT 37241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449890311658880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |