Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178165.1_202017-04-
21] 1,545 sequences; 11,875,116 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 154 3e-32
seq650 140 8e-28
seq11 138 3e-27
seq1418 134 3e-26
seq683 131 4e-25
>seq1388
Length=48357
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||||||||||||||||||||| ||||| || || || |||| || || || ||||||||
Sbjct 15322 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 15381
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||||| || || || || | | ||| ||||| ||||||| ||||||||||| ||
Sbjct 15382 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 15441
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
|| || || ||||| || || |||||||| ||||||||| || || || |||||
Sbjct 15442 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 15501
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| ||||| | |||||
Sbjct 15502 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 15531
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| || || | | ||| || || ||||| |||||
Sbjct 16240 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 16299
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | ||||| || ||||| | ||||||||||||||||| ||
Sbjct 16300 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 16359
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||| ||||| ||| ||||||||| | |||||| || || || ||
Sbjct 16360 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 16419
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| ||||| | ||||||
Sbjct 16420 CAAAGTCTTAACAAAGATCTGCAT 16443
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 15791 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 15850
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | |||||| || ||||||| ||||||||||| || || || |||
Sbjct 15851 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 15910
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || ||||| || ||||||||| || || || ||||| || || |||||
Sbjct 15911 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 15970
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 15971 TTGACGAAAATTTGCAT 15987
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 16019 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 16078
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | |||||| || ||||||| ||||||||||| || || || ||
Sbjct 16079 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 16138
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || |||||||| ||||||||| || || || ||||| || || |||||
Sbjct 16139 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 16198
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 16199 TTGACGAAAATTTGCAT 16215
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| ||||| ||||| || | |||||||| || || ||||| ||||| | || || ||
Sbjct 16454 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 16513
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| ||||| |||||||| || || ||||| | | |||||| || ||||| | ||||||
Sbjct 16514 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 16573
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||| || || || || ||||| |||||||| || || |||||| || | ||
Sbjct 16574 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 16633
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| || || | ||||||
Sbjct 16634 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16671
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| || || | | ||| || |||||||| || ||
Sbjct 15556 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTG 15615
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | ||||| || ||||| | ||||| || || || |||||
Sbjct 15616 CTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTT 15675
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| ||||| || || ||||| || ||||||||| || || || ||||| || ||
Sbjct 15676 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 15735
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || | |||||
Sbjct 15736 TAGAGTTTTGACGAAAATTTGCAT 15759
>seq650
Length=9723
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || ||
Sbjct 6687 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 6746
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 6747 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 6806
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 6807 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 6866
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 6867 GGTCTTACCAGTCAAAGTCTTGACAAA 6893
>seq11
Length=177817
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| ||||| || || ||||||||||| || || | | || || ||
Sbjct 8829 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 8770
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 8769 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8710
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 8709 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 8650
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 8649 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8611
>seq1418
Length=52496
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| || ||||||||||| || || | || || || ||
Sbjct 15256 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 15197
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 15196 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 15137
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || ||||||||||| |||||| || | ||||||
Sbjct 15136 GTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 15077
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| || ||
Sbjct 15076 GGTCTTACCAGTCAAAGTCTTAACGAA 15050
>seq683
Length=305
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 88 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 147
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | |||||| || ||||||| ||||||||||| || || || ||
Sbjct 148 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 207
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || |||||||| ||||||||| || || || ||||| || || |||||
Sbjct 208 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 267
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 268 TTGACGAAAATTTGCAT 284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159129054223925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |