Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04-
21] 1,892 sequences; 11,970,001 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq51 109 6e-19
seq30 86.0 7e-12
seq519 84.2 2e-11
>seq51
Length=49323
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||||||||| || ||| || ||||| || |||||||
Sbjct 17401 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 17460
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| || || |||||||| || || || | || || || || | ||
Sbjct 17461 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 17520
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | || | | | ||||||| ||||| |
Sbjct 17521 AATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 17579
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | ||||||||||| || || | ||||| |||||||| |||||
Sbjct 17580 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 17628
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||| || | || |||||||| || ||||| ||||
Sbjct 17047 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 17106
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| |||||||||||||| || || || | | ||| || || | ||
Sbjct 17107 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 17166
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||||| |||||| || | | | | ||||||| ||||| ||
Sbjct 17167 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 17226
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||||||||| || || | ||||| |||||||| |||||
Sbjct 17227 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 17274
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||||||||| || ||| || ||||| || |||||||
Sbjct 16819 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 16878
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| || || |||||||| || || || | || || || || | ||
Sbjct 16879 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 16938
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| |
Sbjct 16939 AATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 16997
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| ||||||||
Sbjct 16998 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 17046
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||||| | | ||| | ||| || ||| |||||| ||||| ||||||||||
Sbjct 17629 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 17688
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| |||||||||||||| || || || | || || || || | ||
Sbjct 17689 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 17748
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | || ||| ||||| |
Sbjct 17749 GATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 17807
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || |||||||| || || | ||||| || || || |||||
Sbjct 17808 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 17856
Score = 86.0 bits (94), Expect = 7e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || || | ||| || | || | ||| |||||||||||||||||| || |
Sbjct 16135 ACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 16194
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | | || ||||| || ||||| || || || | || |||||||| | ||
Sbjct 16195 CAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGG 16254
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||||| | | ||| | | | |||||| ||||| |
Sbjct 16255 AATACCTTCCTTGT-CTTGAATTTTTGACTTAACGTTGTCAATAGTGTCGGAAGATTCAA 16313
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || ||||| || || || || ||||||||
Sbjct 16314 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16362
>seq30
Length=77243
Score = 86.0 bits (94), Expect = 7e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | ||| |||||||| || ||| |||||||| || ||||| ||||
Sbjct 14700 ACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 14641
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | ||||||||||| || || | || || ||||| | |||
Sbjct 14640 TAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 14581
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| || |||| | | | ||||| ||||| ||
Sbjct 14580 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 14521
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAG 42200
|| | |||||||| || || || | ||||| || |||
Sbjct 14520 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 14481
>seq519
Length=145521
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| || || ||||| ||| || |||||||| ||||| ||||
Sbjct 17818 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 17759
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | |||||||||||| || || | || || ||||| | |||
Sbjct 17758 CAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 17699
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| | |||| |||| | | | ||||| ||||| |
Sbjct 17698 GATACCTTCCTTGT-CTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 17640
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199
| || | |||||||| || || || | ||||| |||||
Sbjct 17639 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 17600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543199953017280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |