Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04- 21] 1,892 sequences; 11,970,001 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq51 109 5e-19 seq519 100 3e-16 seq15 84.2 2e-11 >seq51 Length=49323 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 17047 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 17106 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| |||||||| |||||| | || | || ||| || || ||||| Sbjct 17107 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 17166 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || ||||| ||| || || | || || || || || Sbjct 17167 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 17226 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | ||| || ||||||||||| || || || || ||||| Sbjct 17227 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 17274 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| ||||| | || || || || |||||||||||||| | | || | || Sbjct 17642 CTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCG 17701 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| |||||||| |||||| | || | | || || || ||||| || ||||| || Sbjct 17702 TCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 17761 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| ||||| ||| || || | ||||| | || ||||| | |||| | Sbjct 17762 TCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATG 17821 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||||||||| || |||||||| ||||| Sbjct 17822 GTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 17856 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | ||| | ||| || ||||| |||||||| ||||| | Sbjct 17401 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 17460 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| | || | | || || || ||||| Sbjct 17461 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 17520 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| ||| || || | || || || || || Sbjct 17521 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 17580 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | ||| || ||||||||||| || || || || ||||| Sbjct 17581 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 17628 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | ||| | ||| || ||||| |||||||| ||||| | Sbjct 16819 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 16878 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| | || | | || || || ||||| Sbjct 16879 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 16938 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| ||| || || | || ||| | || || Sbjct 16939 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 16998 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || |||| || || || ||||||||||| Sbjct 16999 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 17046 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || | || || |||| || || || |||||||| ||||| || | Sbjct 16135 ACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 16194 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| || || || |||||| | || | | |||||||| ||||| Sbjct 16195 CAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGG 16254 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| |||||| ||| || || | || || | || || Sbjct 16255 AATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCGGAAGATTCAAC 16314 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 16315 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16362 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | || ||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 16591 ACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 16650 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| || ||||| || ||| |||| | | ||| || || ||||| Sbjct 16651 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 16710 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| ||||| || || || | || || | || || Sbjct 16711 GATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 16770 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 16771 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16818 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | || ||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 16363 ACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 16422 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | ||||| || ||||| || ||| |||| | | ||| || || ||||| Sbjct 16423 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 16482 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| ||||| || || || | || || | || || Sbjct 16483 GATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 16542 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || |||| || || |||||||||||||| Sbjct 16543 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 16590 >seq519 Length=145521 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || |||||||||||||||||||| || | Sbjct 17818 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 17759 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | |||||| || ||| | || | | || ||||| || || Sbjct 17758 CAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 17699 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 17698 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 17639 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || |||||||| || || ||| Sbjct 17638 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 17599 >seq15 Length=102391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | || | || ||||| ||||| |||||||| || | Sbjct 93642 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 93701 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || | | || ||||| || || Sbjct 93702 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 93761 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 93762 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 93821 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||||| ||||| ||||| || |||||||||||||| || Sbjct 93822 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 93872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632983400480