Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04- 21] 1,892 sequences; 11,970,001 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 105 7e-18 seq57 89.7 5e-13 >seq4 Length=223549 Score = 105 bits (116), Expect = 7e-18 Identities = 287/437 (66%), Gaps = 7/437 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || ||||||| || || || || || || ||||| || |||||| || Sbjct 169292 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 169351 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | |||| ||||| ||| || |||| ||||| | | ||||| ||||| Sbjct 169352 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 169411 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || || ||| || || || || || | | |||| || | ||| | | ||||| Sbjct 169412 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 169471 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || || || || ||||| | | |||||| | || || ||||| Sbjct 169472 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 169531 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || || || || |||||||||||| | || ||| | || || | || Sbjct 169532 AACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 169591 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || || || ||||| || || | | ||| || || | | ||||||||||| || Sbjct 169592 CTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 169651 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||| | | || ||||| | ||| ||||| ||| | || || ||||| ||| Sbjct 169652 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 169708 Query 94309 AAACGCGTCG-AGAAAA 94324 || || |||| |||||| Sbjct 169709 AAGCGTGTCGAAGAAAA 169725 >seq57 Length=43660 Score = 89.7 bits (98), Expect = 5e-13 Identities = 275/424 (65%), Gaps = 6/424 (1%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || | |||||||| || || || || || |||||||| |||||| | || Sbjct 6225 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 6284 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||| ||| || |||| || | | || || ||||| | || | Sbjct 6285 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 6344 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | ||| || || || | || | | || || || | ||| ||| ||||| || | Sbjct 6345 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 6404 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 || |||||||| || || || ||||| | | |||||| | || || ||||| || Sbjct 6405 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 6464 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || || ||||||||||||||| | ||| ||| ||||||| | | | | Sbjct 6465 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 6524 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| || || | | || |||| | |||| | || || || || Sbjct 6525 AGCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGA-- 6582 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 || | | || ||||| | ||| ||||| ||| | || |||||||| ||||||| Sbjct 6583 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGACCTTTTCATGAAAC 6641 Query 94313 GCGT 94316 | || Sbjct 6642 GTGT 6645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494711499796320