Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04- 21] 1,892 sequences; 11,970,001 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 271 9e-68 seq57 132 6e-26 seq26 91.5 2e-13 >seq4 Length=223549 Score = 271 bits (300), Expect = 9e-68 Identities = 891/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 169205 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 169264 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 169265 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 169323 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 169324 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 169383 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 169384 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 169443 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 169444 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 169502 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 169503 GTTTAATTCCTATGATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTA 169562 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || |||||| | || Sbjct 169563 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGAT 169621 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 169622 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 169680 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 169681 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 169740 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 169741 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 169799 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 169800 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 169856 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 169857 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 169916 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 169917 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 169976 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 169977 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 170036 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 170037 CCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 170096 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| |||||| || |||||||||| |||||| | |||| Sbjct 170097 AATTACATGAAATTGCTAAAGTTGTCACTCGTAATTTAAACAGAGTCATTGATCGTAATT 170156 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 170157 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 170216 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 170217 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 170276 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || ||||| || || ||||| ||| | | || || || | Sbjct 170277 GTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 170336 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 170337 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 170396 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 170397 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 170454 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 170455 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 170512 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 170513 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 170559 >seq57 Length=43660 Score = 132 bits (146), Expect = 6e-26 Identities = 929/1463 (63%), Gaps = 66/1463 (5%) Strand=Plus/Plus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 ||||| || ||||||| || ||| ||| | | ||||||| | |||| || Sbjct 6053 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 6112 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| || ||| | || | ||||| || ||| | ||||||||||| ||||| || Sbjct 6113 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 6172 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCA 111722 ||||| || |||| || | |||||| || | || |||| ||||| | ||| Sbjct 6173 TCTGTGCTGAAGACTTATAATTTGATGTC--GTTAAGATAC-TTCACTCACGCTTCCCCA 6229 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 || | |||||||||||||| ||| || |||||||| |||||| | ||||| | Sbjct 6230 ACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATG 6289 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||||| || || ||| | || ||||| | ||| | | |||||||| || || || Sbjct 6290 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 6349 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAG 111901 || |||||| | || | || ||| | | || | || ||| | ||| ||| Sbjct 6350 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCC-ACAGGTTCTTATATCGC 6408 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| || ||| ||| | || | ||||| ||| |||| || || || || || Sbjct 6409 TGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGC 6468 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC-----TATCTT-GA 112015 || ||||| |||| | || || |||| || || || || | |||| || Sbjct 6469 CCGTTATGTGGACCAGGGTG---GTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGA 6525 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 ||||||||| || |||||| | || || | || | | | || ||| | || || Sbjct 6526 GCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGA 6585 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | |||| | ||| | ||| | ||||| ||||| || || || |||||||| | | Sbjct 6586 AATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGACCTTTTCATGAAACGTG 6644 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTT-GTCCAGACAAGGCACCCGGTCTCTCCGAT 112193 || | ||| ||| |||| || | |||| | |||| || || ||| | ||| Sbjct 6645 TTCAAGAGGATGGGCCTTGGACTTTGTTTTCGCCCAG-TGCTGCCCCAGGTTTAGATGAT 6703 Query 112194 GCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACT 112253 | |||||| || ||||||| || || || ||||| |||| |||| | | Sbjct 6704 GTGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAAAGAGAAGGTCGTG---GT 6760 Query 112254 GCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGG 112312 || | ||| | ||||| | || ||| | |||| | || || || || || Sbjct 6761 AAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAG-CACAGACAGAAACAGG 6819 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 |||||| | ||| |||| || ||||| |||||| |||| || ||| |||| || || Sbjct 6820 TACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGG 6879 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 | ||||| || ||| | ||| |||||| | |||| | | | ||||| || Sbjct 6880 TACTATCAAATCATCTAACTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAAC 6939 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CA--AGTATGTGGATCCAGA----G 112484 || || ||||| | || || || || || || || || || || | |||| | Sbjct 6940 TGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGCATTCGT-TGAGGTTTCAGAAGATG 6998 Query 112485 ACAAA-----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAA 112539 ||| | | | ||| || | | | ||||| || | ||| | || | | Sbjct 6999 GTAAAACTGCAAGCTATAATTTCGAGAGATTGCACGAGATTGCTAAAGTCATTACTCACA 7058 Query 112540 ACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTA 112596 || | ||||||||||| || | |||| || || ||| ||| ||| | || || | Sbjct 7059 ACTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAG---GCTAGAAATTCAA 7115 Query 112597 ATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTT 112656 |||||| || | || |||| ||| |||||||| || | || ||| | || | | Sbjct 7116 ATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGCTTGGCCGATACTTATATGATGT 7175 Query 112657 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC--AATGCGCGTATATTTGAGAC 112714 || | | ||||| || || ||||| | || || || | || || || || Sbjct 7176 TGCGTCTACCCTTTGAATCGGAAGAAGCTCA--AACTCTAAACAAACAAATCTTCGAAAC 7233 Query 112715 AATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGA 112774 || || || || ||||||| || | || ||||| | || ||| |||| Sbjct 7234 TATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAATATTC 7293 Query 112775 AACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTG 112833 || ||||| |||||||||||||| |||||| | | ||||| ||||||| |||| | Sbjct 7294 TACTTTTGAAGGTTCTCCAGCTTC-CAAGGGTATTTTACAATTCGATATGT-GGAACGCT 7351 Query 112834 AGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACG-CA---TCAAGGAGAAGGG 112888 | |||| || | || ||||| | || ||| || | || | || | | ||| Sbjct 7352 AAACCATTTGGCATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTTAA--ACATGGG 7408 Query 112889 TCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 | | | ||| ||||| ||||||||||||||||| ||||| || | ||||| | Sbjct 7409 T-TAAGAAAC--TCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTT 7465 Query 112947 GGTAATAATGAATGCTTTGAACC 112969 ||| |||||||||| || ||||| Sbjct 7466 GGTTATAATGAATGTTTCGAACC 7488 >seq26 Length=80596 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 80128 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 80187 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 80188 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 80242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620727719442240