Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04-
21] 1,892 sequences; 11,970,001 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq51 118 8e-22
seq519 96.9 3e-15
>seq51
Length=49323
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||||||||| | ||| |||||| ||||| || |||||||| || ||| | ||||
Sbjct 17416 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 17475
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| |||||||||||||| |||| || |||||||| | |||| || ||||||||
Sbjct 17476 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 17535
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || || || | | | | || || | || ||||| | || || ||
Sbjct 17536 TTGAATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 17595
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || |||||||| || ||||| ||||||||
Sbjct 17596 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 17628
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || ||||||| | ||| | ||||| ||| ||| || ||||| |||||||||||
Sbjct 17630 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 17689
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| ||| | |||| || | ||||||||||||||| |||| || |||||||| | ||
Sbjct 17690 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 17749
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || |||||||| ||| || || || | | | || || | || ||
Sbjct 17750 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 17809
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || |||||||| || || |||||||||||
Sbjct 17810 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 17856
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||||||||| | ||| |||||| ||||| || |||||||| || ||| | ||||
Sbjct 16834 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 16893
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| |||||||||||||| |||| || |||||||| | |||| || ||||||||
Sbjct 16894 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 16953
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || || || | | || || || | || ||||| | || || ||
Sbjct 16954 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 17013
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||| || || |||||||| |||||
Sbjct 17014 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 17046
>seq519
Length=145521
Score = 96.9 bits (106), Expect = 3e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
||||||||||| ||||| ||||| | ||| | |||| |||||||||||||| |||||
Sbjct 17781 TCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAACTGCTTACCAGCAAAG 17722
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || ||||| || | || | || |||||||| ||||||| || |||
Sbjct 17721 ATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTG 17662
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || || || | || || |||| || || || || || |||||||| || |||
Sbjct 17661 TCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACA 17602
Query 48756 AAA 48758
|||
Sbjct 17601 AAA 17599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380928816055116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |