Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04- 21] 1,892 sequences; 11,970,001 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq51 109 9e-19 seq519 102 1e-16 >seq51 Length=49323 Score = 109 bits (120), Expect = 9e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | ||||| || || || || | || || ||| | | Sbjct 17045 TGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTG 16986 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | || || || ||||| ||| || ||||| ||||| || ||||||| Sbjct 16985 ACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 16926 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| ||| | || || ||||||| | | |||||||| | Sbjct 16925 AAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 16866 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | ||||| || || |||| ||||| |||| Sbjct 16865 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 16818 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || || || || ||||| || ||| | || || ||| || Sbjct 17627 TGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCG 17568 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || ||||| ||| || ||||| ||||| || ||||||| Sbjct 17567 ACACGATCGATAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 17508 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| ||| | || || ||||||| | | |||||||| | Sbjct 17507 AAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 17448 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | ||||| || || |||| ||||| |||| Sbjct 17447 TTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 17400 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || | || || ||| | || Sbjct 17855 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 17796 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || ||||| ||| || ||||| || || || ||||||| Sbjct 17795 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 17736 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || | Sbjct 17735 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 17676 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || | ||| | || || | ||||||| |||| Sbjct 17675 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 17628 >seq519 Length=145521 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 17606 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 17665 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 17666 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 17725 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| || || || || |||||| || | || || || || ||||||||||| Sbjct 17726 GCTGGTAAGCAGTTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 17785 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 17786 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 17819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786147807164640