Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04- 21] 1,892 sequences; 11,970,001 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq51 111 1e-19 seq519 86.0 6e-12 seq15 84.2 2e-11 >seq51 Length=49323 Score = 111 bits (122), Expect = 1e-19 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| |||| || || | || || | || || ||| | | Sbjct 16362 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 16303 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || ||||||| || || || ||||| || || || ||| Sbjct 16302 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 16243 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 |||||| | || | | ||| |||||||| ||||||| ||||| |||| | | |||| Sbjct 16242 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 16185 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412 |||||||||| || ||||| |||| | || || || ||||| || || || |||||| Sbjct 16184 ATATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGTAACTGATCAG 16125 Query 25413 TC 25414 || Sbjct 16124 TC 16123 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || ||||| ||| | ||||| | || || ||| || | Sbjct 17628 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 17569 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || |||||| || || || ||||| || || ||||| Sbjct 17568 GACACGATCGATAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 17509 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 |||||| | || | | ||| || ||||| ||||| | ||||| |||| | |||| | Sbjct 17508 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATA 17451 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||||| ||||| || || | ||||| ||||| ||||||||||| || Sbjct 17450 ACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 17402 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || ||| | || || || | || || | || || ||| | Sbjct 17046 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 16987 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || |||||| || || || ||||| || || ||||| Sbjct 16986 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 16927 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 |||||| | || | | ||| || ||||| ||||| | ||||| |||| | |||| | Sbjct 16926 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATA 16869 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||||| ||||| || || | ||||| ||||| ||||||||||| || Sbjct 16868 ACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 16820 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || ||||| ||| | ||||| | || || ||| || | Sbjct 17274 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 17215 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||||| || || || ||||| || || ||||| Sbjct 17214 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 17155 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || || | || | | ||| || || || ||||| | ||||| |||| | | |||| Sbjct 17154 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTG--ACTACA 17097 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | || ||||| ||||| || |||| || ||||| ||||||||||| || Sbjct 17096 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 17048 >seq519 Length=145521 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| || || || || || || | ||||| | ||||| ||| | || ||||| Sbjct 17600 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 17659 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || || ||| ||| || || || ||||| || || || || |||||| | Sbjct 17660 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 17719 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361 || | | || || || | ||||| | ||||| |||| | | ||||| ||||||| Sbjct 17720 ATCTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 17777 Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| | || ||||| || ||||||||||| || Sbjct 17778 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 17817 >seq15 Length=102391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | || || || || |||||||| || | || || | ||||| ||| | Sbjct 93873 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 93814 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||||| || | || || || || || || || ||||| || || || Sbjct 93813 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 93754 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 || |||||| | || | | || || ||| | ||||||| ||||| | | ||| || Sbjct 93753 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 93694 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || ||||| ||||| || | || || || || ||||||||||| || Sbjct 93693 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 93643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445083873517440