Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04- 21] 1,892 sequences; 11,970,001 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq15 109 4e-19 seq51 100 2e-16 seq519 89.7 4e-13 >seq15 Length=102391 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| || || || || || || ||||| |||||| ||||| ||| | Sbjct 93872 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 93813 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || || ||| | | || || || || ||||| ||||| | || ||| Sbjct 93812 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 93753 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || || ||||| |||||| || |||| || ||| ||| Sbjct 93752 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 93693 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| |||||||| ||||| || || ||||| || |||| || Sbjct 93692 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 93643 >seq51 Length=49323 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || || ||| |||| || ||||| || ||| | || ||| | | Sbjct 16590 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCC 16531 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| |||||| || |||||||| | || |||||| Sbjct 16530 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 16471 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || | |||| ||| || || ||| |||||||| || ||| || || |||||| Sbjct 16470 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 16411 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 || ||||| |||||||| || || || || ||||| Sbjct 16410 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAG 16376 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| | || || ||||| || ||| | || ||| | | Sbjct 16818 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 16759 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| |||||| || |||||||| | || |||||| Sbjct 16758 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 16699 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || | |||| ||| || || ||| |||||||| || ||| || || |||||| Sbjct 16698 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 16639 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 || ||||| |||||||| || || || || ||||| Sbjct 16638 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAG 16604 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || ||| |||| || ||||| || ||| | || ||| | Sbjct 17046 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 16987 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || || |||||| ||||| ||||| | || |||||| Sbjct 16986 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 16927 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | ||| || || ||| | ||||| || ||| || ||||| ||| Sbjct 16926 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 16867 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| ||||| | ||||| || ||||| || |||| || Sbjct 16866 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 16820 >seq519 Length=145521 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327 |||||| || || |||||||| |||||||| || ||||| ||| | || || | Sbjct 17599 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 17658 Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387 || | | || || ||| ||| ||||| ||||| | || ||| |||||||| | Sbjct 17659 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 17718 Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447 || | ||| || || || || ||||| || ||| || || |||||||| ||||| Sbjct 17719 GATCTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 17778 Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||| || | || ||||| ||||| || |||| || Sbjct 17779 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 17817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402320322782336