Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178175.1_202017-04-
21] 1,892 sequences; 11,970,001 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1766 134 1e-26
seq35 96.9 3e-15
>seq1766
Length=123456
Score = 134 bits (148), Expect = 1e-26
Identities = 447/690 (65%), Gaps = 34/690 (5%)
Strand=Plus/Plus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303
|| || ||| |||||||||| || |||| || | ||||| |||| |||| | |||
Sbjct 15559 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 15618
Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360
|| | ||| | || || || |||| | |||||| || |||||| |
Sbjct 15619 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 15672
Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
| || || || ||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 15673 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 15732
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || |||||||| ||||| || | || || || |||
Sbjct 15733 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 15789
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| |||||||| | || ||| ||| || || |||| |||| | | || | |
Sbjct 15790 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 15849
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || ||| || || ||||| || | ||||| |||| | | | ||||
Sbjct 15850 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 15904
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | ||| ||| |||| ||| || |||||| | |
Sbjct 15905 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 15964
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | || ||||||||||||| |||||||| ||||| ||| |
Sbjct 15965 CTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 16024
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||||||||| || | || || || ||| | || ||| | | | ||||||
Sbjct 16025 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 16084
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825
| |||||||||||| ||| | | ||||||| |||| || || | ||| |
Sbjct 16085 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 16144
Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
||||||| | | | |||||||| | ||| || | || || || |||||||
Sbjct 16145 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 16204
Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
|| || || ||||||| |||||||
Sbjct 16205 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 16234
>seq35
Length=64679
Score = 96.9 bits (106), Expect = 3e-15
Identities = 172/251 (69%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
|| ||||| |||||| ||| | || |||| ||||| | || || || ||||||||
Sbjct 23953 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 24012
Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222
|| |||||| || | || |||||||| | ||| | | | | || |||||
Sbjct 24013 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 24072
Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282
|| |||| || || || |||| |||| |||| | | ||||| || | || | ||||
Sbjct 24073 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 24132
Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342
||| | || |||| || |||||||| || | ||| |||||| | | ||| || ||
Sbjct 24133 CAAATCACCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTTAAAGAC 24192
Query 41343 ATTGATGATTT 41353
|||||||||||
Sbjct 24193 ATTGATGATTT 24203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397446835161460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |