Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq109 183 4e-41 >seq109 Length=17983 Score = 183 bits (202), Expect = 4e-41 Identities = 829/1301 (64%), Gaps = 36/1301 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 13195 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 13136 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 13135 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 13076 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 13075 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 13017 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 13016 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 12957 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 12956 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 12897 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 12896 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 12837 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 12836 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 12777 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 12776 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 12717 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 12716 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 12660 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 12659 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 12600 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 12599 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 12540 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 12539 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 12480 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 12479 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 12423 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 12422 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 12366 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 12365 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 12306 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 12305 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 12246 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 116899 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 12245 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 12186 Query 116900 TGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | | |||| |||||| ||||| | || || || || || |||| ||| |||| Sbjct 12185 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 12127 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCG 117018 | | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 12126 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTA 12068 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | || Sbjct 12067 TGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTG 12008 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| Sbjct 12007 TCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGA 11948 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 || |||| ||||| || ||||| | ||||| | ||||| Sbjct 11947 GGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 11907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613476463289280