Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq109 250 3e-61 >seq109 Length=17983 Score = 250 bits (276), Expect = 3e-61 Identities = 867/1339 (65%), Gaps = 38/1339 (3%) Strand=Plus/Plus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 11852 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 11910 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 11911 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 11970 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 11971 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 12030 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 12031 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 12090 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 12091 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 12150 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620 ||| || || ||||| | || | ||| | |||| || | | || | || Sbjct 12151 ACACTGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 12209 Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680 || || |||||||| || ||||| | || || |||| | | ||||| ||| | Sbjct 12210 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 12269 Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739 ||||| | |||| | ||| | ||| | ||||| |||||||| ||||| |||||||| Sbjct 12270 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 12328 Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798 | | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 12329 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 12387 Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858 |||| ||||| |||||||| || || || || |||||| |||||||||| | Sbjct 12388 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 12447 Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918 | ||| | ||| | | ||| | | ||| | | ||||||| || | Sbjct 12448 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 12504 Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978 |||||||||| | | | ||||||| || || |||||| ||| ||||||||| || | Sbjct 12505 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 12564 Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | ||||| |||||| || || | || ||||| | |||| ||| ||||| Sbjct 12565 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 12624 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086 | || ||||| |||||| | || || | || | || | | || || Sbjct 12625 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 12684 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 12685 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 12744 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| | Sbjct 12745 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 12804 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 |||||||||| | ||||||| | | |||||||| |||||||| || ||||| || | Sbjct 12805 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 12864 Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326 || |||||||||| || ||||| | ||| | || ||||| || | Sbjct 12865 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 12924 Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 | ||||| ||| | | || || || || | || || || |||||||| |||| Sbjct 12925 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 12984 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || | || ||||| ||||| ||||| | || || ||||||||||||| | | | Sbjct 12985 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 13043 Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504 || | || | || ||||| | || ||| || | |||| | || | ||| || | Sbjct 13044 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 13102 Query 105505 TAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 105560 || |||| |||||| |||||||| || || ||||| | ||||| |||||| Sbjct 13103 AAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTT 13158 Query 105561 ATAATGAATGCTTTGAACC 105579 |||||||||| || ||||| Sbjct 13159 ATAATGAATGTTTCGAACC 13177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583231578633920