Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178195.1_202017-04- 22] 2,577 sequences; 12,498,113 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1894 394 1e-104 seq3 293 3e-74 >seq1894 Length=102925 Score = 394 bits (436), Expect = 1e-104 Identities = 1388/2146 (65%), Gaps = 55/2146 (3%) Strand=Plus/Minus Query 68370 CAAT-GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 |||| ||||| ||||| | | ||||| | || || | | ||||||||||||||| | Sbjct 37062 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 37003 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| || |||||||||| |||||||||||||||||||| | |||| || Sbjct 37002 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGG---GG 36946 Query 68489 CTA-TATGAATA--TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCA 68545 | || ||| | |||| || ||| |||||| || | | | ||| || |||| Sbjct 36945 CACGTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 36886 Query 68546 TTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT 68605 | || || ||| ||||||| | ||||||||||| |||||| | | | || | || | Sbjct 36885 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAATTCTT 36826 Query 68606 CTGGAAGGCTCG-TATT--TTGAATGGATCCACCATCGGATATAATTATATTCT---TGA 68659 ||||| | | | || ||||||||| ||| | | |||| | || || | | Sbjct 36825 GTGGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCA 36769 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | |||| ||| | | || || | | || | | || || || | | Sbjct 36768 TACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCT 36709 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||| || ||||| || | ||| | ||| ||||| || |||||| | | ||| Sbjct 36708 GGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATT 36649 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 |||||| |||| ||||| | || |||||||| ||||| ||||||| || || Sbjct 36648 CATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAAT 36589 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTT----AGATGTTTCCAATCCCAAAGATCA 68895 |||||| |||||| | ||||| ||||||| || ||| ||||||||| | | Sbjct 36588 TTCTAACACCATGCTTCATGAT---ATCTTTTCTTAAGGTGTC-CCAATCCCACATGCCG 36533 Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA 68955 | ||| | ||| | ||| | ||||| || || | | ||| ||||| | Sbjct 36532 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 36473 Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 | ||||| || || || |||| | ||||||||||||| || || | | | | | Sbjct 36472 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 36413 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 ||||| ||||| || || | |||| || | ||||| | ||| ||||| || Sbjct 36412 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 36353 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 |||| || || || | || || | || ||||| || | | | || |||||||||||| Sbjct 36352 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 36293 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 36292 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 36233 Query 69196 TTTCGGACTACTACTTTAAC-----CACGTCCTTT-----AGTT---TGAGAAAATCAAA 69242 || || || |||||| | || || ||| |||| || | || || | Sbjct 36232 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 36173 Query 69243 TCGTCCATCTATAA----CAAACATATTCAGT----GCTACAGATGCTAGATTACAAACT 69294 | ||| || | || ||| | || | | || || || || | |||||||| Sbjct 36172 CCATCC-TC-AGAAGTTTCAATGA-ATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACA 36116 Query 69295 GCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATA 69354 || |||| | | || |||| | || || |||| || | ||||| Sbjct 36115 GCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATG 36056 Query 69355 GTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGA 69414 || | |||| |||||| ||| ||||||| || |||||||||| || || || Sbjct 36055 ACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGT 35996 Query 69415 GTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG 69474 |||||||||||| | |||| ||| | ||| || | ||| | || || || Sbjct 35995 GTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATA--- 35939 Query 69475 GTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAA 69534 ||||| ||| ||||| || || | |||||||| || || || || || || Sbjct 35938 GTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAA 35879 Query 69535 ACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA 69594 ||| || |||||| | ||||| | | |||| ||| ||| || | Sbjct 35878 CAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCG 35819 Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || ||||| || ||||| |||||||| ||||| || | |||||| | | | || Sbjct 35818 ACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 35759 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || ||| ||| | ||| || | ||||||| |||||||||| Sbjct 35758 TCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGT 35699 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || | || | | || |||| |||||| || ||||| || | || | |||| Sbjct 35698 TCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCA 35639 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 |||||||| | || | | ||| ||||| | ||| ||||| |||| ||||| |||| | Sbjct 35638 GTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCA 35579 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || ||| || ||| ||||| ||| ||| |||||| || || || || |||| Sbjct 35578 ATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTG 35519 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954 || || | |||||| ||||| ||||| || || ||||| || || || ||||| Sbjct 35518 GAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATG 35459 Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014 || | ||||| ||||||||| | | | ||| || ||||| || || || ||| Sbjct 35458 GCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGA 35399 Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATA 70074 || |||||||| || ||||| ||| | || || || ||||| | ||| | || ||| Sbjct 35398 GAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATA 35339 Query 70075 TC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 || | || | || || |||| ||||| | ||| | | ||| || || ||||| || Sbjct 35338 TCTCTACCG-TGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCAC 35280 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 || | || ||| | | | || || ||||| ||||||||| |||||||| |||| Sbjct 35279 TTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTA 35220 Query 70194 -TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTA 70252 |||||| ||||| || || | ||| | || || | ||||||||| | || | || | Sbjct 35219 CTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAA 35161 Query 70253 TATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGT 70312 ||| ||| | ||||| || |||| | |||||| | || ||| || || Sbjct 35160 TATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 35101 Query 70313 TGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATA 70372 | | | |||||| | || | | |||| ||||| | |||| || |||||||| || | Sbjct 35100 TATAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAA 35041 Query 70373 TGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTA 70432 |||| |||||||| ||||| | || || || ||||| ||||| | ||| | Sbjct 35040 TGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGTCATATAAGCGCATG 34981 Query 70433 TTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||| || ||||| | |||| ||| || ||||| || || | ||| Sbjct 34980 TTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATA 34935 >seq3 Length=304868 Score = 293 bits (324), Expect = 3e-74 Identities = 930/1423 (65%), Gaps = 43/1423 (3%) Strand=Plus/Plus Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATA- 69074 ||||| |||||||| || | || || ||| ||| |||||| | || || || || Sbjct 216667 TAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAG 216725 Query 69075 ATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCT 69134 | | || | ||| | | ||| ||||| ||||| || |||| | | ||||||||||| | Sbjct 216726 ACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTT 216785 Query 69135 CTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAG 69194 | |||||||| || ||| || |||| ||||| |||||| || |||| | | || | Sbjct 216786 CATATTTGAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA- 216844 Query 69195 ATTTCGGACTACT-ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA 69253 | || || || | |||||| | | || | | | | |||| | | | | || | Sbjct 216845 AGTTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGCAGTTT 216904 Query 69254 TAACA--------------AACATATTC----AGTGCTACAGATGCTAGATTACAAACTG 69295 || || ||| || | || || | ||| |||| ||||||||||| Sbjct 216905 TACCATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTG 216964 Query 69296 CTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAG 69355 | |||| | | ||||| | || || ||||| ||| ||||||||| Sbjct 216965 CAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGTTAGATGATTTGATAG 217024 Query 69356 TCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAG 69415 | || | || || || || |||| ||||||| |||||||| |||| || || || | Sbjct 217025 TACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTG 217084 Query 69416 TACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAG--CATTTATTAC 69473 |||| ||||| |||| | || | ||| | | ||| | || | | | || ||| Sbjct 217085 TACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACA--ACTTTTGGGCTTTAATT-- 217140 Query 69474 GGTCTTGTAACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCC 69531 || || ||| ||||||||| | || | |||||||| ||| |||||||| ||| Sbjct 217141 -GTTTTACCACGACCTTCTCTTT--CGTAACGAGTATATAGTTCTTCAAATTCATCACCC 217197 Query 69532 CAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCC 69591 || |||||||| || || || || | || | | || | ||| |||| || Sbjct 217198 CACACATCATCTAAACCTGGGGCAGCACTGGGTGAAAATAAAGTCCAAGGCCCATCCTCT 217257 Query 69592 TTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTA 69651 | ||| |||||||| || ||||| || ||||| ||||| || | |||||| | | | Sbjct 217258 TGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGA 217317 Query 69652 TTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710 ||||||| || || ||| ||||| | | ||||| ||| || | ||||| | |||||| Sbjct 217318 ATTTCTTCCTTACCATGTGTTTTTCTGAT-ATCGACAAAGTCGAAGATATCTGCATGCCA 217376 Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770 ||| || | | | || | | || |||| || || || ||||| || | || | Sbjct 217377 TGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACG 217436 Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830 |||||| ||||| | || | | ||| ||||| | || || || |||| || || || Sbjct 217437 GGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACC 217496 Query 69831 AGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCAT 69890 || |||||| ||| | | || || || | ||| ||||| | || ||||| | Sbjct 217497 AGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAGT 217556 Query 69891 TTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950 ||| || || | |||||| |||||| || ||||| ||||| || || ||||| | Sbjct 217557 TTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTT 217616 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 |||| || | ||||| |||||||||| ||||| || || || || ||||| || Sbjct 217617 CATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGT 217676 Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT-TTCAATAGCTGATT 70069 || || ||||||||||| || || || | || ||| || || |||| | | |||| Sbjct 217677 TGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCA-CAGATT 217735 Query 70070 CTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129 | ||||| | ||| || |||| ||| |||||||| | || ||||||||| |||||| Sbjct 217736 CGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTG 217795 Query 70130 CCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGT 70189 || || | || | | | | || ||| || ||||| || || || || ||||| Sbjct 217796 CCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACG 217855 Query 70190 TGTA-TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTA 70248 | || || ||| || || ||||| | || | || || | |||| || | || | Sbjct 217856 TATACTGGAAA-TCCCTATCGTACACGATGGCCGAGTTCAAAGTATCTTTGTTTTCCATG 217914 Query 70249 ACTATATCCATAACAGTAGGT--GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAA 70306 || || | ||| | | || || || || |||| | || ||| | || |||| Sbjct 217915 ACAATGT-TGTAA-ATTTCGTCCGAAATCATAGGAGCATGCTTTCCAGTAGCTGGGTTAA 217972 Query 70307 CATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366 ||| | |||||| || || || | ||| | ||| | |||| ||| ||||| | Sbjct 217973 TCCAGTCGTGTAAATCCTCAATAACTTTGGAGAATTGCTTTGTGGTTTGCTTATGTAAGT 218032 Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 | || ||||| ||||| || |||||| | ||||| ||||| || Sbjct 218033 TAGAGATGGCGATTCTAGCGGCTAGAGTGGCATAATCAGGGTG 218075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686886672950280