Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178195.1_202017-04- 22] 2,577 sequences; 12,498,113 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1894 378 1e-99 seq3 286 5e-72 >seq1894 Length=102925 Score = 378 bits (418), Expect = 1e-99 Identities = 1388/2155 (64%), Gaps = 58/2155 (3%) Strand=Plus/Minus Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 |||| ||| | || || ||||| | || ||||| | || || | | |||||||||| Sbjct 37069 TTCTGATCAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATA 37010 Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACT 75483 || || || | ||| |||||||||| |||||||| ||||||||||| ||| | Sbjct 37009 CCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTT 36950 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || | | | || ||||| || ||| |||||| || | | | ||| || Sbjct 36949 GGGGCACGTAAGAACAA-ATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGC 36891 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||| || || || |||||||| | ||||||||||| ||| ||| | | | || | Sbjct 36890 TGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAA 36831 Query 75604 ATCATCTGGAAGATTTG-TATT--TTGAATGGATCCGCCATCAGATATAATTGTATTCT- 75659 || | ||||| |||| || ||||||||| ||||| | |||| || || Sbjct 36830 TTCTTGTGGAACGTTTGGTAAGCCTTGAATGGA---GCCATTTTGTGTAATCAGATACTG 36774 Query 75660 --TGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAAC 75717 | || | |||| ||| | | || || | | || | | ||| || || Sbjct 36773 TTTCATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCAC 36714 Query 75718 AATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCAC 75777 || || ||||| || || || || | || | ||| ||||| || |||||| | Sbjct 36713 AACCTGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAA 36654 Query 75778 AGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAA 75837 | ||||||| | ||||| ||||| | || || ||||| ||||| ||||||| || Sbjct 36653 ACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAA 36594 Query 75838 ACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT----AGATATTTCCAATCCCAAA 75893 |||||| | |||||| | |||| ||||||| || | | ||||||||| | Sbjct 36593 GGAATTTCTAACACCATGCTTCATGAT---ATCTTTTCTTAAGGTGTC-CCAATCCCACA 36538 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | | ||| ||||| | ||| | ||||| || || | |||| |||| Sbjct 36537 TGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATC 36478 Query 75954 CATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013 | | | |||||||| | |||||||| | ||||||||| ||| || || | | Sbjct 36477 CTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGG 36418 Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG 76073 | | |||||| ||||| || || | |||| || | ||||| | |||||| | Sbjct 36417 CATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATG 36358 Query 76074 GATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133 | || |||| || || || | || || || || ||||| || | | |||| ||||||| Sbjct 36357 GCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTAT 36298 Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193 ||||| ||||||| || |||||| || |||||| |||||| ||| || | | | | Sbjct 36297 GTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGT 36238 Query 76194 TGAGATTTCTGACAACTACTTTAAC-----CACGTCCTTT-----AGTT---TGAGAAAA 76240 | | ||| | ||| |||||| | || || ||| |||| || | || Sbjct 36237 TTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAG 36178 Query 76241 TCAAATTTTCCATC--------TATCAC--AAACATATTAAGAGCTATAGATGCTAGATT 76290 || || ||||| | ||| || | |||| || | || || | || Sbjct 36177 TC----TTACCATCCTCAGAAGTTTCAATGAATGCTGGTAAG-GCAACGGAAGCCAAGTT 36123 Query 76291 ACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACA 76350 |||||| || |||| | | | |||| | || || ||||| || | Sbjct 36122 ACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGA 36063 Query 76351 CTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAAC 76410 |||||| || | |||| ||| || ||| ||||||| | ||||| |||| ||| Sbjct 36062 CTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAAC 36003 Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTT 76470 || || || ||||||||| | || | ||| | ||| || | ||| | | ||||| Sbjct 36002 GAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTT 35943 Query 76471 TATTATAGATTTGTATCG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCA 76528 || || || || ||||| ||| | || | ||||||| ||||| || Sbjct 35942 GAT---AGTCTTACCACGACCTTCTTTCT--CGTAGCGGGTATATAGAGCCTCAAACTCG 35888 Query 76529 TCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCA 76588 || || || ||| ||||||||| | | ||| | | |||| ||| ||| Sbjct 35887 TCACCGTAACAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCA 35828 Query 76589 TCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 76648 | ||| | || || ||||| || |||||||| |||||||||||| || | ||||| Sbjct 35827 TTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTT 35768 Query 76649 GTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAA 76708 | | | ||| || || || ||||| ||| ||| | || || | ||||||| | Sbjct 35767 GCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCA 35708 Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768 ||||||||||| || || | || | |||| |||| ||||||||| ||||| || | | Sbjct 35707 TGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACA 35648 Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828 || | |||||||||||| |||| | | ||| ||||| | |||||||| ||||| ||| Sbjct 35647 TAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTT 35588 Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCT 76888 || |||| ||| ||| ||| || |||||| ||| ||| ||| || || || || Sbjct 35587 GTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCA 35528 Query 76889 GCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCA 76948 || |||| || || | |||||| ||||| ||||| || || ||||| ||| || Sbjct 35527 GCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCC 35468 Query 76949 TCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAAC 77008 ||| ||||| || | ||||| ||||||||| | | ||| || ||||| ||| Sbjct 35467 TCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAAC 35408 Query 77009 AATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACT 77068 || || ||||| || ||||| || ||||| ||| | | || || ||||| | | | Sbjct 35407 AACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCA 35348 Query 77069 GCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGT 77128 || || ||||| | || || |||| ||||| | ||| | | ||| || || ||| Sbjct 35347 GCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGT 35288 Query 77129 TCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAA 77188 || | | | || ||| | | || || || |||||||||||||||||||||| Sbjct 35287 TCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAA 35228 Query 77189 TAGTTGTA-TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 || |||| |||||| ||||| || || | ||| | || || | ||| ||||| | || Sbjct 35227 TAACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTC 35169 Query 77248 GGTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATT 77307 | ||||||| |||| ||| || || |||| | | ||| | || ||| Sbjct 35168 CATGACAATATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATT 35109 Query 77308 AACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAG 77367 || || || | | ||||| | || | |||| ||||| | |||| || |||| Sbjct 35108 GACGTATCTATAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAA 35049 Query 77368 ATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT 77427 ||| || | ||| ||||| || ||||| | || || || ||||| ||||| || | Sbjct 35048 ATTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGT-CATAT 34990 Query 77428 -GGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATA 77481 || | |||| || ||||| | |||| ||| || || || || || | ||| Sbjct 34989 AAGCGCATGTTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATA 34935 >seq3 Length=304868 Score = 286 bits (316), Expect = 5e-72 Identities = 925/1420 (65%), Gaps = 37/1420 (3%) Strand=Plus/Plus Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATA- 76077 ||||| |||||||| || | || || ||| ||| ||||| | || ||||| || Sbjct 216667 TAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAG 216725 Query 76078 ATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCT 76137 | | || | ||| | | ||| || | ||||| || |||| | ||||||||||||| | Sbjct 216726 ACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTT 216785 Query 76138 CTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAG 76197 | |||| ||| || ||| || |||| || || |||||| || |||| | | || | Sbjct 216786 CATATTTGAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA- 216844 Query 76198 ATTTCTGACAACT-ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---------TT 76247 | || ||| | | |||||| | | || | | | | |||| | | || Sbjct 216845 AGTTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGCAGTTT 216904 Query 76248 TTCCATCTATCACAAACAT------ATTA----AGAGCTATAGATGCTAGATTACAAACG 76297 | |||||| || |||| | || || || ||||| |||| ||||||||| Sbjct 216905 TACCATCT-TCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACT 216963 Query 76298 GCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATA 76357 || |||| | || ||||| | || || |||| ||| | |||||| Sbjct 216964 GCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAGTTAGATGATTTGATA 217023 Query 76358 GTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGA 76417 || || | || |||||||| |||| ||||||||| ||||||||||| | || || Sbjct 217024 GTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGT 217083 Query 76418 GTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTTATTA 76475 || || ||||| |||||| || | ||| | | ||| | ||| | | |||| ||| Sbjct 217084 GTACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACA--ACTTTTGGGCTTTAATTG 217141 Query 76476 TAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCC 76535 | ||| || |||||||| || | ||||||| |||||||||||| |||| Sbjct 217142 T---TTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCAAATTCATCACCCC 217198 Query 76536 AAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCT 76595 | |||||||| ||||| || || | || | | || | ||| ||||| || | Sbjct 217199 ACACATCATCTAAACCTGGGGCAGCACTGGGTGAAAATAAAGTCCAAGGCCCATCCTCTT 217258 Query 76596 TAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAC 76655 ||| |||||||| || |||||||| |||||||||||| || | ||||| | | | Sbjct 217259 GAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAA 217318 Query 76656 GTTCTTCATTTCC-TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCAT 76714 |||||| || || ||| || ||| | | ||| | || || | ||||| | ||||||| Sbjct 217319 TTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCAT 217377 Query 76715 GGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774 || || | | | || | | |||| |||| || ||||| ||||| || | ||| | | Sbjct 217378 GGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGG 217437 Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834 ||||| ||||| |||| | | ||| ||||| | ||||| || ||||| || || ||| Sbjct 217438 GCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCA 217497 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATT 76894 | |||||| || | ||| || || | ||| || || | || ||||| || Sbjct 217498 GCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAGTT 217557 Query 76895 TTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATC 76954 || || || | |||||| |||||| || ||||| || || || ||| |||||| || Sbjct 217558 TTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTC 217617 Query 76955 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTA 77014 ||| || | ||||| |||||||||| |||| || || || || || || || Sbjct 217618 ATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTT 217677 Query 77015 GGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT 77074 || || || |||||||| || || || | | ||| || || | | || | ||| Sbjct 217678 GGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCG 217737 Query 77075 ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 ||||| | ||| || |||| || |||||||| | || ||||||||| |||||| | Sbjct 217738 ATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTGCC 217797 Query 77135 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 77194 | | || | | | | |||||| || |||| || || || || ||||| | Sbjct 217798 ACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACGTA 217857 Query 77195 TA-TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAAC 77253 || || ||| || || ||||| | || |||| || | | || || | || | || Sbjct 217858 TACTGGAAA-TCCCTATCGTACACGATGGCCGAGTTCAAAGTATCTTTGTTTTCCATGAC 217916 Query 77254 AATATCCATGACAGTGGT-AGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACAT 77312 ||| | | | | || ||||| || |||| | ||||| | || |||| Sbjct 217917 AATGT-TGTAAATTTCGTCCGAAATCATAGGAGCATGCTTTCCAGTAGCTGGGTTAATCC 217975 Query 77313 AGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCG 77372 ||| ||| || || || || | | ||| | ||| | |||| ||| |||| || | Sbjct 217976 AGTCGTGTAAATCCTCAATAACTTTGGAGAATTGCTTTGTGGTTTGCTTATGTAAGTTAG 218035 Query 77373 ATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 | | ||| |||||||| |||||| | ||||| ||||| || Sbjct 218036 AGATGGCGATTCTAGCGGCTAGAGTGGCATAATCAGGGTG 218075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712911434600640