Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178205.1_202017-04-
21] 766 sequences; 11,742,880 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq717 158 1e-33
seq516 122 8e-23
seq520 118 1e-21
seq23 100 3e-16
>seq717
Length=48821
Score = 158 bits (174), Expect = 1e-33
Identities = 179/240 (75%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || |||||||||| |||||||||||| | ||||||||||||||| |
Sbjct 32486 AAAAATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGAT 32427
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || || || | || || ||||| || ||| ||||||| || || ||
Sbjct 32426 GTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTG 32367
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||||||||| |||||||| ||||| | ||||| | ||| ||| ||| |||||
Sbjct 32366 TTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTC 32307
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | ||||| || | ||||||||||| || || | ||| || ||||||||||||||
Sbjct 32306 GGAGGATTCGACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32247
Score = 147 bits (162), Expect = 2e-30
Identities = 176/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| ||||||||| ||||| ||||| || || || | |
Sbjct 32713 AAAATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATG 32654
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|||||||| || || | || ||||| || || || ||||||| ||||||||
Sbjct 32653 TTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTTTGT 32594
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
|||||||||||||||||||| ||||| | |||||| | ||| ||| | ||| |||||||
Sbjct 32593 TGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCA 32534
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || || || || ||||| || |||||
Sbjct 32533 GAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 32475
Score = 125 bits (138), Expect = 6e-24
Identities = 171/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| |||||||||||| | ||||||||||||||| | |
Sbjct 32941 AAAATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATG 32882
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|| || || || || | ||| || || || || || |||| || ||||| ||
Sbjct 32881 TTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGT 32822
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
||||| ||||| ||||||||||| || | |||||| |||||| | | | ||||||
Sbjct 32821 TGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCG 32762
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || |||||||| || || || |||||
Sbjct 32761 GAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32703
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| | ||| || | ||| | ||| || |||||||| | || || || |
Sbjct 33157 CCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 33098
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || || ||||| ||| |||| || ||||||||||| |||||||||
Sbjct 33097 AGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 33038
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | |||||||| ||| ||| | | | |||||||| || ||
Sbjct 33037 ATACCTTCCTTGTCTTGAATTTTTGACTTCACGTTGTCAATAGTGTCAGAAGATTCAACC 32978
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || || || || || || || |||||
Sbjct 32977 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 32931
Score = 102 bits (112), Expect = 7e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| || || || || ||||| || | ||| ||||| || || | || || |
Sbjct 32226 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 32167
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || ||| ||||||| |||||||| ||||||||||| |||||||| ||||| | ||
Sbjct 32166 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 32107
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
|||| | ||| ||| | ||| || || | || || || | || |||||||| |
Sbjct 32106 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 32047
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||| || || || ||||||||
Sbjct 32046 CGGTCAAAGTCTTGACGAAAATCTGCAT 32019
>seq516
Length=220293
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||| | ||||||||||||||| | ||| || ||| |
Sbjct 8714 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8655
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| || || || ||||||| |||||||| || || || |||
Sbjct 8654 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8595
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | |||||||| || ||
Sbjct 8594 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8535
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | ||| || || || || |||||
Sbjct 8534 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8488
>seq520
Length=171470
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| || ||||||||||| ||||| ||||| | ||| || || |
Sbjct 127821 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 127880
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || |||| || || || ||||||| |||||||| || || || ||
Sbjct 127881 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 127940
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| |||| |||||| | | | |||||||| || ||
Sbjct 127941 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 128000
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | |||||||| || ||||| | ||| || |||||
Sbjct 128001 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 128038
>seq23
Length=63550
Score = 100 bits (110), Expect = 3e-16
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| ||||| || ||||| ||||||||||| | ||| || | |
Sbjct 1388 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGT--CAG 1331
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
|||| ||| | || |||| || || || ||||||| |||||||| || || || |
Sbjct 1330 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 1271
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| |||||||| ||||| | || || | |||||| | | | ||||||| || |
Sbjct 1270 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 1211
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999
| || | |||||||| || ||||| | ||| || || |||
Sbjct 1210 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 1170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448286907611760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |