Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178205.1_202017-04- 21] 766 sequences; 11,742,880 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq644 298 7e-76 seq314 174 2e-38 >seq644 Length=72959 Score = 298 bits (330), Expect = 7e-76 Identities = 910/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 10772 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 10713 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 10712 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 10655 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 10654 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 10596 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 10595 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 10538 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 10537 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 10478 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 10477 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 10418 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 10417 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 10358 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 10357 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 10298 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 10297 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 10239 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 10238 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 10181 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 10180 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 10121 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 10120 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 10061 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 10060 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 10004 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 10003 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 9945 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 9944 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 9885 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 9884 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 9826 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702 |||| || || | |||||| || |||||||| || || || | || | | || Sbjct 9825 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 9766 Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 |||| | ||| | || | ||||| || || ||| || || || |||| ||| Sbjct 9765 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATA 9707 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820 ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 9706 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 9647 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 9646 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 9587 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| Sbjct 9586 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 9527 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999 || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | Sbjct 9526 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 9468 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || || || || || ||| || || ||| ||||||||||| | ||| Sbjct 9467 AGACATCAAGTTATAAGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 9408 Query 112060 GACCCGCAT 112068 ||| | ||| Sbjct 9407 GACTCTCAT 9399 >seq314 Length=122520 Score = 174 bits (192), Expect = 2e-38 Identities = 888/1392 (64%), Gaps = 48/1392 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||||| || |||||| ||||||||||||| ||| | ||||| | || || Sbjct 36040 GTACATGTTTGAGGTCACTGGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGA 36099 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGA---TG 110821 ||| ||||||||||||||||| ||||| ||| | | |||| | | || | || Sbjct 36100 GGCGGTTGGCATTGGTGCCATAGTCAAAGA--GTTTCTTA-ACCCATGT--TTAACAATG 36154 Query 110822 -CGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAA 110879 | || ||| || ||||| || | || |||||| | |||| |||| || | Sbjct 36155 TCCTTTCTTAAGGTT-TCCCAATCCCACATGCCAAATGGTTTAGCGTTCC-ACATATCGA 36212 Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939 | || | | || | ||| || |||||||| ||||| || ||| ||||| || Sbjct 36213 ATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTT 36272 Query 110940 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999 |||||||||||| || || || | || || || || ||||| ||||| | | Sbjct 36273 GGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGT 36332 Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCG 111058 | || | ||||| ||||| ||||| | |||| || ||| ||| | ||| || Sbjct 36333 TTATAGTTTGAGCTTCTTCTGATTCAAA-GGGTAGACGCAACATCATATAAGTATCGGCC 36391 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC- 111117 | ||| || ||||| | | |||||||||| || |||||| || |||| || ||| Sbjct 36392 AAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAATTTC---TAGCCTCG 36448 Query 111118 --AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175 ||| ||||| |||| | ||| || |||||||| | || | ||||| | || | Sbjct 36449 GGAACTGGATAGTAATTACGGTCGATAACTCGGTTCAAGTTGTGGGTAATGACTTTAGCA 36508 Query 111176 ATTTCATGAAGTTTTTCATAATCAAA------AGTGCGAGTCTCTT------CATTGACA 111223 || || || | | | || ||| | | ||| | |||| | | || Sbjct 36509 ATCTCGTGTAATCTCTCGAAATTATAGCTTGCAGTTTTACCATCTTCTGAAACCTCAACG 36568 Query 111224 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 111283 | ||| ||||| || || || ||||| ||||| || || |||||| | || Sbjct 36569 AATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATAT 36628 Query 111284 TCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 111343 || | ||||| ||||||||| || || || || || || |||| |||||| || Sbjct 36629 TCGACGATTTCACAACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTC 36688 Query 111344 TTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTG 111403 ||| |||| || || ||||| || | |||| | || || || || || ||||||| || Sbjct 36689 TTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGC 36748 Query 111404 AGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTC 111462 | ||| || | ||| ||| | | ||| | ||| | || | || || || || Sbjct 36749 AAAATGGCATACCACAACTTTTG-GGC---TTTAATTGTTTTACCACGACCTTCTCTTTC 36804 Query 111463 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522 ||| || || || ||||||| || |||||| | | || | |||||| || Sbjct 36805 GTAACGAGTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGC 36864 Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582 ||| | || | || ||| | ||| | || | ||| || |||||||||||||| || Sbjct 36865 ACTTGGCGAAAACAAAGTCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGGTCAGG 36924 Query 111583 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 111642 ||||| || | | || | |||||| ||| ||||| | ||| || | || Sbjct 36925 GATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCT 36984 Query 111643 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAGATAGACTGCGATAGATC 111701 | || | || || | |||||| || |||||||||| ||||| | | |||| || | Sbjct 36985 GATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAAGA-AAAGGGCGAAAGCAC 37043 Query 111702 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 | || | | ||| | || | ||||| || || || || || || |||| | Sbjct 37044 CAGGTCTCTTG-TTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATC 37102 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 || ||||| | || | ||| ||| || || || ||| ||| ||| | Sbjct 37103 ATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGG 37162 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | | ||| || | |||| ||| || || || || || ||||| || | Sbjct 37163 ATGTTGTTGATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTC 37222 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | ||| |||| ||||| | ||| ||||| ||||| |||| || | ||| || ||| Sbjct 37223 AAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGAC 37282 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 || || || ||| |||||||| ||||| | ||||| | |||||| |||| || || Sbjct 37283 ATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA-GTATCT 37341 Query 111998 T-GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 112056 | |||||| | || |||| || ||||| || || || || ||||| || | Sbjct 37342 TAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAG 37401 Query 112057 TGCGACCCGCAT 112068 || || ||||| Sbjct 37402 CGCCACACGCAT 37413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025986593600