Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178205.1_202017-04- 21] 766 sequences; 11,742,880 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq516 95.1 1e-14 seq520 89.7 4e-13 seq717 82.4 6e-11 >seq516 Length=220293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| ||| | ||| ||||| ||||| || ||||| |||| | Sbjct 8714 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8655 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||||||||| || || ||| | || | ||||||||||| || Sbjct 8654 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8595 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| ||||| || || || |||| | | | || || | || | Sbjct 8594 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8535 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | ||||||||| || || || || || || | ||||||||||| Sbjct 8534 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8488 >seq520 Length=171470 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || || | ||||||||| |||||||||||||| ||||| || | | Sbjct 127821 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 127880 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||| || || ||| | || | ||||||||||| || Sbjct 127881 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 127940 Query 101132 ACGCCTTCTTTGTC 101145 | ||||| ||||| Sbjct 127941 ATACCTTCCTTGTC 127954 >seq717 Length=48821 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101009 TTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCG 101068 || || || | ||| || || || | ||| | ||| || || |||||||||||||| || Sbjct 33160 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 33101 Query 101069 GCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACG 101128 | || ||| | |||||| | |||||| || ||| | || | ||||| |||||| Sbjct 33100 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 33041 Query 101129 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT 101188 || | ||||| ||||| ||||||| ||||| | | | | || || | || Sbjct 33040 GGAATACCTTCCTTGTCTTGAATTTTTGACTTCACGTTGTCAATAGTGTCAGAAGATTCA 32981 Query 101189 GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | ||| ||||| || || |||| ||| || | ||||||||||| Sbjct 32980 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 32931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409656975560394