Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178215.1_202017-04-
21] 934 sequences; 11,703,810 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq41 107 1e-18
seq64 102 6e-17
seq45 93.3 3e-14
>seq41
Length=37534
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 8713 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 8654
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 8653 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 8594
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 8593 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 8534
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 8533 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8502
>seq64
Length=18763
Score = 102 bits (112), Expect = 6e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||||||||||||||||||||| | || ||| ||| ||||||||||| || ||
Sbjct 12063 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 12004
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| |||| | ||||||||| || || | |||||||| || ||| | | ||||
Sbjct 12003 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTG 11944
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| | || ||| | |||||| | || || ||||| ||
Sbjct 11943 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTC 11884
Query 18309 TTTACAAAA 18317
|| ||||||
Sbjct 11883 TTGACAAAA 11875
>seq45
Length=32718
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
|||||| || || || |||||||| |||||||| | || ||| ||| |||||| | |||
Sbjct 32574 GTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTG 32515
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| || ||| | || | |||||| || || || | |||||||| || |||||
Sbjct 32514 TTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 32455
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
| ||| || | ||| ||||||| | || || | ||| || | || || ||
Sbjct 32454 TGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 32395
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
|| ||| || ||||||||||||||
Sbjct 32394 CAGTGTCTTGACAAAAATTTGCAT 32371
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | |||| |||||| || ||||| ||||| ||||||||||| | || ||| ||
Sbjct 32360 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 32301
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||||| | || || || ||| | || | ||| ||||||||| || | |||||
Sbjct 32300 CCGTCTTCTAGCTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 32241
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
||||| ||||| ||||| | ||| |||||| | || || | |||
Sbjct 32240 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 32181
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | || || || | ||||| || |||||||||||
Sbjct 32180 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379339681879830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |