Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178215.1_202017-04-
21] 934 sequences; 11,703,810 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq5 365 6e-96
seq8 199 5e-46
>seq5
Length=340566
Score = 365 bits (404), Expect = 6e-96
Identities = 1337/2072 (65%), Gaps = 45/2072 (2%)
Strand=Plus/Minus
Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 278788 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 278729
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||||||||||||||||||||| |||||||| | | || |
Sbjct 278728 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 278669
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
|| | ||||| ||| ||| |||||| || || | | || || ||||| |
Sbjct 278668 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 278609
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072
| ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| |
Sbjct 278608 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 278550
Query 65073 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 65126
|||| ||||| || | |||||||| ||| | || ||||| || || | ||
Sbjct 278549 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 278493
Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186
| |||| ||| | | || || | | || | | || || || || ||
Sbjct 278492 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 278433
Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246
||||| || || || || | || | ||| ||||| || ||||| | | | |||
Sbjct 278432 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 278373
Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306
|||| ||||| ||||| | || |||||||| ||||| ||||||| || ||||
Sbjct 278372 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 278313
Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 65363
|||| ||| ||| | | || |||||||| |||| ||||||| ||| | | |
Sbjct 278312 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 278256
Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423
||| ||||| ||||| | | || |||||| |
Sbjct 278255 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 278196
Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483
|| |||||||| || ||||||| ||||||||||||| || || | | | | ||||
Sbjct 278195 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 278136
Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543
|| ||||| ||||| | ||||||| | |||||| ||||||||| || |
Sbjct 278135 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 278076
Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603
|| || || || | ||| || | ||||||||||| | | | || |||||||||||| ||
Sbjct 278075 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 278016
Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663
|| || || |||||| || ||| || |||||| ||| || | | | || | |||
Sbjct 278015 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 277956
Query 65664 C---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAATCG 65710
| | |||| | | ||| | || || |||| || | || || | |
Sbjct 277955 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 277896
Query 65711 --CTCATCTATTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACC 65765
|||| || ||| | || | || ||||| || |||| |||||||| ||
Sbjct 277895 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 277836
Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 65824
|||| | | | | |||| | || ||| ||| ||| || | |||||||| ||
Sbjct 277835 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACACC 277777
Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884
||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||
Sbjct 277776 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 277717
Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944
||||||| | |||| ||| | ||| | | ||| | | | || || || || ||
Sbjct 277716 AGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTT 277660
Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004
| |||| | ||||| | ||||| | || |||||||| || || ||
Sbjct 277659 ACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATC 277600
Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064
| || |||||| | ||| | | || | ||| || | || | || ||
Sbjct 277599 GCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACG 277540
Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124
||||| || |||||||||||||| ||||| || |||||||| | | | ||||||
Sbjct 277539 CTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTC 277480
Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184
|| || ||||| ||| ||| | || | | |||||| |||||| |||||||
Sbjct 277479 TTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAG 277420
Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244
||| | ||| | | ||||| | ||| || || ||||| || | || | || |||||
Sbjct 277419 GTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTT 277360
Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304
||| |||| | | ||| ||||| | ||| || || ||||| || || || | || ||
Sbjct 277359 ATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTA 277300
Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364
||| ||| |||||| ||| || |||||| || || || || |||| || ||
Sbjct 277299 AGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAAT 277240
Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424
|| || ||| || || || || || || ||||| ||| || ||| ||||| ||
Sbjct 277239 CAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAAC 277180
Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484
| ||||| |||||||| | ||| || ||||| || || || ||||| ||
Sbjct 277179 CAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGC 277120
Query 66485 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544
||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| |
Sbjct 277119 GTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCT 277060
Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-T 66603
|| || |||| |||||| | ||| | | || || || | ||| | | ||||
Sbjct 277059 ACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGAC 277001
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAA 66662
||| ||| | | || || || |||||||||||||||||||||||| |||| ||||
Sbjct 277000 CGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA 276941
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722
|| |||| || || | ||| | ||||| | ||||||||| | || | || | ||
Sbjct 276940 AA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTG 276882
Query 66723 ATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 66782
| | | || || || |||| | || ||| | || |||||| || | |
Sbjct 276881 TAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAA 276822
Query 66783 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842
| ||| || | || | | |||| ||||| | |||| ||| |||| ||| || | |||
Sbjct 276821 AGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCA 276762
Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
||||| || |||| |||| ||||| |||||
Sbjct 276761 ATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 276730
>seq8
Length=256826
Score = 199 bits (220), Expect = 5e-46
Identities = 589/899 (66%), Gaps = 13/899 (1%)
Strand=Plus/Plus
Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906
|||| |||||||| || |||||||| ||| || | |||||||| || ||||| |
Sbjct 23691 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 23749
Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966
|||| | || || || ||||||||||||||||| || || || || || ||| |
Sbjct 23750 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 23809
Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026
| || || || | || ||| || ||||| || || | ||| ||||| | |
Sbjct 23810 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 23869
Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 36084
|| ||||| |||| | |||||| | || | ||||| | |||| |||||||
Sbjct 23870 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 23927
Query 36085 AGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144
|| || || || | ||| | || | || ||| | | |||||
Sbjct 23928 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 23987
Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204
|||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||||
Sbjct 23988 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 24047
Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264
|||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| ||
Sbjct 24048 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 24107
Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC---- 36320
|| || || || | ||||| | | |||||||||| ||||| || ||| |||
Sbjct 24108 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGG 24166
Query 36321 CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380
|| || ||| || ||||| || |||||| |||||||||| | || || |
Sbjct 24167 CGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 24226
Query 36381 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 36440
| | || ||||| || | | | |||| ||| || || | || ||||| ||||
Sbjct 24227 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 24286
Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500
| | || |||| || ||||| |||||||| ||||| || ||||||||||
Sbjct 24287 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 24346
Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560
| ||||| | ||| || ||||| || | || ||| | || |||||||| || || |
Sbjct 24347 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 24406
Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TTTGGT--G 36617
||||| || || ||||| || | || || ||| || | ||| ||| ||
Sbjct 24407 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTTTCGTTCA 24466
Query 36618 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || |
Sbjct 24467 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 24526
Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736
| || || || || || | |||||| ||||| || | || || |||| ||||
Sbjct 24527 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 24585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658165115832560
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