Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178215.1_202017-04- 21] 934 sequences; 11,703,810 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq18 129 7e-25 seq3 114 2e-20 seq803 104 3e-17 >seq18 Length=130085 Score = 129 bits (142), Expect = 7e-25 Identities = 386/588 (66%), Gaps = 26/588 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| || Sbjct 52608 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 52549 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || ||||| | || ||||| | | ||| ||||| | || | ||| | Sbjct 52548 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 52489 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| | |||| | || ||||| ||| ||||| || ||||| || || ||| Sbjct 52488 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 52429 Query 164578 GCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | ||| | | ||| | || || ||||| || |||||||| ||| | |||| Sbjct 52428 GGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGAG 52373 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 || || || ||| ||||||| || || | || || ||| |||| || |||| ||| Sbjct 52372 TAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGA 52313 Query 164694 ACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAGA 164750 | | | | || ||| | || | | |||||| ||||| |||| |||||| | || Sbjct 52312 ATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGGA 52256 Query 164751 TGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--GT 164798 | || ||| ||| | | ||| | | || || | || | || || || Sbjct 52255 TTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGT 52196 Query 164799 TAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGG 164858 |||||| ||| | ||||||| |||||||| || || ||||||||||| || | || Sbjct 52195 TAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGG 52136 Query 164859 TATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATT 164918 ||||||||| || |||||||| || |||| | || || || ||| |||| ||| | Sbjct 52135 TATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGT 52076 Query 164919 GAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 || | ||||| |||||||| || ||||| | || |||||||| Sbjct 52075 CCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 52028 >seq3 Length=424459 Score = 114 bits (126), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400 ||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| | Sbjct 30704 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 30645 Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460 | || |||||| | |||||| |||||||||||| ||||| ||| ||||| || | Sbjct 30644 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 30585 Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||| | ||||||||||| |||||| ||||| ||| ||||| Sbjct 30584 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 30542 >seq803 Length=511013 Score = 104 bits (114), Expect = 3e-17 Identities = 367/571 (64%), Gaps = 43/571 (8%) Strand=Plus/Minus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757 ||||||||||||||||||| | |||||| ||| || || |||||| | ||| | | Sbjct 108887 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 108830 Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814 || | ||||||| || | ||| ||| || ||| | ||| | ||||| Sbjct 108829 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGAT--TTGTT 108772 Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874 |||| | || | || || ||| ||||| ||| ||||| || | |||||||| || | Sbjct 108771 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 108712 Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934 ||||||| | ||| || ||| ||| |||||| | || || || ||||| || || | Sbjct 108711 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 108652 Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993 ||||| ||||| || || |||||||| || | ||| || || ||| || || Sbjct 108651 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 108596 Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023 | || | ||| | | |||| || || | || Sbjct 108595 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 108536 Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083 | ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| | Sbjct 108535 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 108476 Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143 || | |||||| | |||||||| |||| ||| |||| || |||||||| ||| Sbjct 108475 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATA 108416 Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203 || || || ||| | || || | | || ||||| |||||||| ||||||||| Sbjct 108415 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 108356 Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTT 7234 || ||||||| || || | ||| ||| ||| Sbjct 108355 AATCCATAAACGGGCCCCAGATCTCCTACTT 108325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595865043194400