Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178215.1_202017-04-
21] 934 sequences; 11,703,810 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 7e-18
seq634 84.2 2e-11
>seq5
Length=340566
Score = 105 bits (116), Expect = 7e-18
Identities = 287/437 (66%), Gaps = 7/437 (2%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || || ||||||| || || || || || || ||||| || |||||| ||
Sbjct 277120 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 277179
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| | | |||| ||||| ||| || |||| ||||| | | ||||| |||||
Sbjct 277180 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 277239
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || ||| || || || || || | | |||| || | ||| | | |||||
Sbjct 277240 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 277299
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||| || || || || ||||| | | |||||| | || || |||||
Sbjct 277300 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 277359
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || || || |||||||||||| | || ||| | || || | ||
Sbjct 277360 AACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 277419
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| || || ||||| || || | | ||| || || | | ||||||||||| ||
Sbjct 277420 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 277479
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | || ||||| | ||| ||||| ||| | || || ||||| |||
Sbjct 277480 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 277536
Query 94309 AAACGCGTCG-AGAAAA 94324
|| || |||| ||||||
Sbjct 277537 AAGCGTGTCGAAGAAAA 277553
>seq634
Length=191160
Score = 84.2 bits (92), Expect = 2e-11
Identities = 178/266 (67%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || | |||||||| || || || || || |||||||| |||||| | ||
Sbjct 105980 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 105921
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||| ||| || |||| || | | || || ||||| | || |
Sbjct 105920 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 105861
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || || || | || | | || || || | ||| ||| ||||| || |
Sbjct 105860 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 105801
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
|| |||||||| || || || ||||| | | |||||| | || || ||||| ||
Sbjct 105800 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 105741
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGT 94161
| || || || |||||||||||||||
Sbjct 105740 CTGCCCGTTATGTGGACCAGGGTGGT 105715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717424106640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |