Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178215.1_202017-04-
21] 934 sequences; 11,703,810 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq45 134 1e-26
seq41 131 1e-25
seq64 118 8e-22
seq70 111 1e-19
>seq45
Length=32718
Score = 134 bits (148), Expect = 1e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || ||| || || || ||||| ||||| || ||||| |||||||| || |
Sbjct 32369 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--G 32312
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||||| || || ||||| | ||||| | |||||| || |
Sbjct 32311 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 32252
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||| || || |||||| ||||| || | || ||||| ||| | ||| |
Sbjct 32251 GGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 32192
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| |||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 32191 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 32142
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || ||||| | ||||| ||||| || ||||| |||||
Sbjct 32141 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32082
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||| | ||| || || || | ||||| | ||||| || |||
Sbjct 32081 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 32022
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || ||||| || | ||| ||
Sbjct 32021 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACC 31962
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 31961 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 31914
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || ||||| ||||| || ||||| |||||||| || |
Sbjct 31913 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA--G 31856
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||||| || || || || | ||||| | |||||| || |
Sbjct 31855 ACAACGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 31796
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||||| || || | || || || ||| ||| |
Sbjct 31795 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 31736
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||| || ||||||||||| |||| ||| || ||||| || ||||||
Sbjct 31735 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 31686
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | ||| || || || | ||||| || || || ||||| || ||||| ||
Sbjct 32597 CCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 32538
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| | ||||||| |||||| || || | ||||| | || ||||| |||
Sbjct 32537 AGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 32478
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || ||||| || | ||| ||
Sbjct 32477 ATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 32418
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 32417 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 32370
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| | |||| || | ||| | ||| || || || || ||||| |||||
Sbjct 31685 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTATAATCAGAC 31626
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||| | ||| || || || | ||||| | ||||| || ||
Sbjct 31625 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 31566
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || || |||||| | ||| ||
Sbjct 31565 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 31506
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 31505 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 31458
>seq41
Length=37534
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || || || ||||| || ||||| |||||||| |||
Sbjct 8731 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8672
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||||
Sbjct 8671 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8612
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| | || ||||| || | ||| ||
Sbjct 8611 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8552
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 8551 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8502
>seq64
Length=18763
Score = 118 bits (130), Expect = 8e-22
Identities = 160/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || ||||| || | || || |||||||| |||||||| || |
Sbjct 12093 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA--G 12036
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| ||||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 12035 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 11976
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||| || || ||| | || ||||| || | ||| |
Sbjct 11975 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 11916
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
| || || || ||||| ||||| |||| ||| || ||||||
Sbjct 11915 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 11875
>seq70
Length=15293
Score = 111 bits (122), Expect = 1e-19
Identities = 169/241 (70%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| || || ||||| | || || || ||||| |||||||| ||
Sbjct 14694 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 14635
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| |||| ||||||| ||||| || ||||| | ||||| | |||||||| |||
Sbjct 14634 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 14575
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| | || || || || | ||| ||
Sbjct 14574 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 14515
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAAT 15189
|| || || ||||| ||||| |||| ||| || || || | | || | ||| ||||| |
Sbjct 14514 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAGCTGTACAAAATTGGAATAAGT 14455
Query 15190 T 15190
|
Sbjct 14454 T 14454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357387931762190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |