Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178215.1_202017-04- 21] 934 sequences; 11,703,810 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq45 120 3e-22 >seq45 Length=32718 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| | Sbjct 32141 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 32082 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | | || || || || || || || ||||||||| || ||||| ||||| Sbjct 32081 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 32022 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| |||||| ||| | |||| |||| ||||| | | || || Sbjct 32021 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG-TCGATAGTGTCAGAAGATTCAAC 31963 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || ||||| || || |||||||| ||||| Sbjct 31962 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 31915 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||||| || ||||| || ||||| || ||||| || ||| | | || || Sbjct 31668 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTC 31609 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || || || || || ||||||||| || ||||| ||||| || || |||||||| Sbjct 31608 CAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 31549 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 |||||| ||| | ||||| ||| ||| || | | || ||||| | || | |||| Sbjct 31548 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 31490 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||| ||| || || ||||||||||| Sbjct 31489 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 31459 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||||||||| || || ||| | | ||| ||||| ||||| || Sbjct 32567 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCG 32508 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || | ||||||| ||||| || ||||| || || ||||||| | ||| ||| || ||| Sbjct 32507 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT-CTTGAATTTTTGACTT 32449 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| || | ||||| | | || || || | ||| | || || || ||||| | Sbjct 32448 AACGTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTG 32390 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || |||||||| ||||| Sbjct 32389 TCTTGACAAAAATTTGCAT 32371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495248528160