Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178225.1_202017-04- 21] 645 sequences; 11,761,021 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=348469 Score = 98.7 bits (108), Expect = 1e-15 Identities = 206/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 171724 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 108288 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 108346 Query 171725 CTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 || || |||| ||| ||| | || || | || |||||||||||||| ||| || | Sbjct 108347 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTCTACGGATTTCAATGGAGGCATTTTGGTG 108406 Query 171785 CTCAATATATCGAC-TGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 171843 || |||| | ||| || || || || || |||||||| | || ||||| | || Sbjct 108407 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 108465 Query 171844 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 171903 |||| ||| || | | || || | |||||| || | || | ||||| Sbjct 108466 GTTATTCATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 108525 Query 171904 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGTC 171963 | || | |||| ||||||| | | || || ||||| | ||| |||| || |||||| Sbjct 108526 CCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTC 108585 Query 171964 AG 171965 || Sbjct 108586 AG 108587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628526132467200