Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04- 21] 1,675 sequences; 11,916,863 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq546 194 1e-44 >seq546 Length=111834 Score = 194 bits (214), Expect = 1e-44 Identities = 551/837 (66%), Gaps = 45/837 (5%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 109338 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 109279 Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 || ||| ||| ||||||||| | ||| | || || | ||| | || || | Sbjct 109278 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 109220 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 |||| ||| ||| | | || ||| | ||||||||||| ||| ||| | || | Sbjct 109219 GTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 109160 Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771 |||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 109159 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 109100 Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 109099 TAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAAC 109040 Query 101832 TTTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------AC 101864 ||| |||| | || ||||| ||| ||| || || Sbjct 109039 GTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAAC 108980 Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 |||||| || || || | ||| || || ||||| ||||||| || || | Sbjct 108979 TGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTG 108920 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATC 101983 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| Sbjct 108919 GGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATA 108861 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042 | |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 108860 ACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTT 108802 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 108801 AGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATC 108742 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 108741 TTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 108682 Query 102163 -AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 108681 TTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAG 108625 Query 102220 AACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAA 102276 | | |||||| ||| || |||| || |||| ||||| || |||| ||| Sbjct 108624 TATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAA 108565 Query 102277 ACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 |||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 108564 ACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 108508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361243825395425