Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04- 21] 1,675 sequences; 11,916,863 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq546 163 2e-35 >seq546 Length=111834 Score = 163 bits (180), Expect = 2e-35 Identities = 372/560 (66%), Gaps = 31/560 (6%) Strand=Plus/Minus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||||||| | ||||| || || ||| ||| | | || ||| | | |||||||| Sbjct 109239 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAAT 109180 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | ||||| || ||||| || ||||| ||||| || || || || | | || Sbjct 109179 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 109120 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || | || ||| ||||||||||| || || || Sbjct 109119 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCC 109060 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218 | ||||||||| || | ||| || || || ||||| | Sbjct 109059 CAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 109000 Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || ||| || || ||||| ||||| || | ||| || || ||||| || Sbjct 108999 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGC 108940 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| || ||| ||||| |||| ||| | |||||||||||| || || Sbjct 108939 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 108880 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | || ||| ||| | ||| || |||||||||| |||| |||| ||| | || Sbjct 108879 TGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 108821 Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446 | | || |||| |||| || ||||||||||||||||| ||||||||||| || || Sbjct 108820 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 108762 Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506 || |||||| ||| ||||| ||| || | |||||||||||| | ||||||||| Sbjct 108761 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 108702 Query 97507 GCATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 108701 CCGTCCCAAATCTTAACACC 108682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346776920729750