Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178255.1_202017-04- 21] 1,675 sequences; 11,916,863 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq21 367 2e-96 seq533 223 5e-53 >seq21 Length=87711 Score = 367 bits (406), Expect = 2e-96 Identities = 1342/2074 (65%), Gaps = 49/2074 (2%) Strand=Plus/Plus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 62369 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 62428 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832 | | || |||||||||| ||||||||||| |||||||| | | || | Sbjct 62429 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 62488 Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 62489 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 62548 Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 78951 | ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 62549 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 62607 Query 78952 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 79005 |||| ||||| || | |||||||| ||| | || ||||| || || | || Sbjct 62608 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 62664 Query 79006 TCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 79065 | |||| ||| | | || || | | || | | || || || || || Sbjct 62665 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 62724 Query 79066 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCA 79125 ||||| || || || || | || | ||| ||||| || |||||| | ||||| Sbjct 62725 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 62784 Query 79126 TTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTT 79185 |||| ||||| ||||| | || ||||| || ||||| ||||||| || |||| Sbjct 62785 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 62844 Query 79186 CTAAGACCGTATGATCTGATTTTATCTTTTAG--AGAT-TCCCAATCCCAAAGATCAGAC 79242 |||| ||| ||| | | || |||||||| || | ||||||||||| | | | Sbjct 62845 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 62901 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || | ||| | |||| | ||||| ||||| | | ||| |||||| | | Sbjct 62902 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 62961 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 ||||| || || || ||||| | |||| ||||||| || || | | | | |||| Sbjct 62962 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 63021 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || ||||| || || | |||| || | ||||| ||||||||| || | Sbjct 63022 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 63081 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 63082 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 63141 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || || |||||| || ||| || |||||| ||| || | | | || | ||| Sbjct 63142 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 63201 Query 79543 C---TGACTATT-----ACTTTGACCACATCCTTT--AGTT---TGAGAAAATCAAATCG 79589 | | || | | | ||| | || ||| |||| || | || || | | Sbjct 63202 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 63261 Query 79590 TCCATCTA--TTACAAACA-TGTTC--AACGCGACAGATGCCAGATTACAAACGGCTACC 79644 ||| | || ||| | || | || || || || |||| |||||||| || Sbjct 63262 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 63321 Query 79645 TCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 |||| | | | | |||| | |||||| ||| | ||| |||| ||| ||| Sbjct 63322 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCT 63381 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 || |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||| Sbjct 63382 AAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCA 63441 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTG 79824 |||||| | |||| ||| | ||| | | ||| | | | || || || || ||| Sbjct 63442 GTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTTA 63498 Query 79825 TATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884 | |||| | ||||| | ||||||| || |||||||| || || |||| Sbjct 63499 CCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCG 63558 Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944 ||| |||||| | ||| | | || | ||| |||| || | || || Sbjct 63559 CTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGC 63618 Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004 ||||| || |||||||||||||| ||||| || | |||||| | | | ||||| Sbjct 63619 TTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCT 63678 Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064 || || ||||| ||| ||| | || | | ||||||| |||||| ||||||| | Sbjct 63679 TTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGG 63738 Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124 || | ||| | | || |||| ||| || || ||||| || | || | || |||||| Sbjct 63739 TAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTA 63798 Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184 || |||| | | ||| ||||| | ||| || || ||||| || || || | || || Sbjct 63799 TTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAA 63858 Query 80185 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 80244 ||| | | |||||| ||| || |||||| || || || || |||| || || Sbjct 63859 GAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATC 63918 Query 80245 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGT 80304 || || ||| || || || || || || ||||| || || || ||||| || Sbjct 63919 AAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACC 63978 Query 80305 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364 | ||||| |||||||| | ||| || ||||| || || || ||||| ||| Sbjct 63979 AAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCG 64038 Query 80365 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 80424 || ||||| ||||| ||||| | || ||||| || | ||| | || ||||| | Sbjct 64039 TGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTA 64098 Query 80425 TGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TT 80483 || || |||| ||||| | ||| | | || || || | ||| | | |||| Sbjct 64099 CCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGACC 64157 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAA 80542 || ||| | | || ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 64158 GTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAA 64217 Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 80602 | |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 64218 A-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT--- 64273 Query 80603 TGGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 80659 || || | | | || || || |||| | || ||| | || ||| || || | Sbjct 64274 TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTAT 64333 Query 80660 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGG 80719 | | ||| || | || | | |||| ||||| | |||| || |||| ||| || | || Sbjct 64334 AAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGG 64393 Query 80720 CTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | |||||||| |||| |||| ||||||||||| Sbjct 64394 CAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 64427 >seq533 Length=259098 Score = 223 bits (246), Expect = 5e-53 Identities = 592/898 (66%), Gaps = 11/898 (1%) Strand=Plus/Plus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 23351 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 23409 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 23410 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 23469 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || || | | || ||| || ||||| || || | ||| ||||| | | Sbjct 23470 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 23529 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 49886 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 23530 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 23587 Query 49887 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 49946 || || || || | ||| | |||| | || ||| | | ||||| Sbjct 23588 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 23647 Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 23648 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 23707 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 50066 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 23708 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 23767 Query 50067 CCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC 50126 || || || |||| ||||| | | |||||||||||| ||||| || ||| | ||| Sbjct 23768 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 23827 Query 50127 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 23828 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 23887 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 | |||||||| || | | | |||| ||| || || | |||||||||||||| Sbjct 23888 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 23947 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 23948 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 24007 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | ||| || ||||| || | || |||| | || |||||||| || || || Sbjct 24008 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 24067 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGT 50420 |||| || || ||||| || | || || ||| | | ||||| | | Sbjct 24068 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 24127 Query 50421 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 24128 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 24187 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || || || || || | |||||| ||||| || | ||| ||||||| |||| Sbjct 24188 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 24245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718253761247000